MCY1 (YGR012W)


Gene profile

Gene name: MCY1
Reference locus (S288C): YGR012W
Gene biotype: protein_coding

Description: Putative cysteine synthase; localized to the mitochondrial outer membrane

Top 10 interactors (score): CYS3 (0.98); MET17 (0.97); AAT2 (0.967); MET5 (0.958); IRC7 (0.954); STR3 (0.953); YLL058W (0.95); STR2 (0.95); YML082W (0.95); SER1 (0.947); GSH1 (0.941); MET10 (0.939); AAT1 (0.931); TUM1 (0.915); SAH1 (0.914); MET6 (0.888); CYS4 (0.856); DUG1 (0.846); SAM4 (0.839); MHT1 (0.839)

Homologues (species, bitscore): CBSL (Homo sapiens, 168.7); Cbs (Mus musculus, 172.2); cbsb (Danio rerio, 171.8); srr (Xenopus tropicalis, 53.9); Cbs (Drosophila melanogaster, 153.3); cysl-1 (Caenorhabditis elegans, 172.6); AT1G55880 (Arabidopsis thaliana, 324.3)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:515207-516388:+ gene-YGR012W_AKU4011 rna-NM_001181141.1_AKU4011 cds-NP_011526.1_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000060.1:59725-60906:- gene-YGR012W_BG1 rna-NM_001181141.1_BG1 cds-NP_011526.1_BG1 99.5 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:516186-517367:+ gene-YGR012W_Bruggeman rna-NM_001181141.1_Bruggeman cds-NP_011526.1_Bruggeman 99.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:514965-516146:+ gene-YGR012W_CAT1 rna-NM_001181141.1_CAT1 cds-NP_011526.1_CAT1 99.7 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:516700-517881:+ gene-YGR012W_CBS1585 rna-NM_001181141.1_CBS1585 cds-NP_011526.1_CBS1585 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:511059-512240:+ gene-YGR012W_CBS436 rna-NM_001181141.1_CBS436 cds-NP_011526.1_CBS436 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:509297-510478:+ gene-YGR012W_CBS6412 rna-NM_001181141.1_CBS6412 cds-NP_011526.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:513376-514557:+ gene-YGR012W_CBS6413 rna-NM_001181141.1_CBS6413 cds-NP_011526.1_CBS6413 99.9 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:512977-514158:+ gene-YGR012W_CENPK1137D rna-NM_001181141.1_CENPK1137D cds-NP_011526.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:503573-504754:+ gene-YGR012W_EthanolRed rna-NM_001181141.1_EthanolRed cds-NP_011526.1_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:506823-508004:+ gene-YGR012W_FaliES1 rna-NM_001181141.1_FaliES1 cds-NP_011526.1_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000020.1:45458-46639:+ gene-YGR012W_JAY291 rna-NM_001181141.1_JAY291 cds-NP_011526.1_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:513412-514593:+ gene-YGR012W_MUCL30387 rna-NM_001181141.1_MUCL30387 cds-NP_011526.1_MUCL30387 99.7 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:515970-517151:+ gene-YGR012W_MUCL30388 rna-NM_001181141.1_MUCL30388 cds-NP_011526.1_MUCL30388 99.7 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:512519-513700:+ gene-YGR012W_MUCL39482 rna-NM_001181141.1_MUCL39482 cds-NP_011526.1_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:521946-523127:+ gene-YGR012W_MUCL42920 rna-NM_001181141.1_MUCL42920 cds-NP_011526.1_MUCL42920 99.4 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:513159-514340:+ gene-YGR012W_NCIM3186 rna-NM_001181141.1_NCIM3186 cds-NP_011526.1_NCIM3186 99.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:506537-507718:+ gene-YGR012W_NCYC1407 rna-NM_001181141.1_NCYC1407 cds-NP_011526.1_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:509226-510407:+ gene-YGR012W_PE2H3 rna-NM_001181141.1_PE2H3 cds-NP_011526.1_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:514276-515457:+ gene-YGR012W_PE2H4 rna-NM_001181141.1_PE2H4 cds-NP_011526.1_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:513159-514340:+ gene-YGR012W_S288C rna-NM_001181141.1_S288C cds-NP_011526.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000021.1:41260-42441:- gene-YGR012W_SA1 rna-NM_001181141.1_SA1 cds-NP_011526.1_SA1 99.8 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:526149-527330:+ gene-YGR012W_ThermosaccDry rna-NM_001181141.1_ThermosaccDry cds-NP_011526.1_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:616444-617625:+ gene-YGR012W_VR1 rna-NM_001181141.1_VR1 cds-NP_011526.1_VR1 99.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000014.1:504747-505928:+ gene-YGR012W_ZTW1 rna-NM_001181141.1_ZTW1 cds-NP_011526.1_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:514241-515422:+ gene-YGR012W_Sparadoxus rna-NM_001181141.1_Sparadoxus cds-NP_011526.1_Sparadoxus 89.3 100.0 Verified 1 1 1 False True False False False

Additional files