Gene name: MCM22
Reference locus (S288C): YJR135C
Gene biotype: protein_coding
Description: Central kinetochore subunit MCM22; Outer kinetochore protein and component of the Ctf3 subcomplex; binds to centromeric DNA in a Ctf19p-dependent manner; involved in chromosome segregation and minichromosome maintenance; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-K and fission yeast sim4
Top 10 interactors (score): MCM16 (0.999); CTF3 (0.998); IML3 (0.996); CTF19 (0.995); OKP1 (0.995); CHL4 (0.992); NKP1 (0.989); MCM21 (0.988); AME1 (0.987); NKP2 (0.982); CNN1 (0.98); DSN1 (0.97); CSE4 (0.964); WIP1 (0.961); HHF1 (0.917); HTA1 (0.839); BIM1 (0.838); CHL1 (0.835); MIF2 (0.824); HTA2 (0.821)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:647557-648276:- | gene-YJR135C_AKU4011 | rna-NM_001181793.1_AKU4011 | cds-NP_012669.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000076.1:25324-26043:+ | gene-YJR135C_BG1 | rna-NM_001181793.1_BG1 | cds-NP_012669.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:663287-664006:- | gene-YJR135C_Bruggeman | rna-NM_001181793.1_Bruggeman | cds-NP_012669.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:667926-668645:- | gene-YJR135C_CAT1 | rna-NM_001181793.1_CAT1 | cds-NP_012669.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:659601-660320:- | gene-YJR135C_CBS1585 | rna-NM_001181793.1_CBS1585 | cds-NP_012669.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:678473-679192:- | gene-YJR135C_CBS436 | rna-NM_001181793.1_CBS436 | cds-NP_012669.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:646378-647097:- | gene-YJR135C_CBS6412 | rna-NM_001181793.1_CBS6412 | cds-NP_012669.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:649035-649754:- | gene-YJR135C_CBS6413 | rna-NM_001181793.1_CBS6413 | cds-NP_012669.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:658419-659138:- | gene-YJR135C_CENPK1137D | rna-NM_001181793.1_CENPK1137D | cds-NP_012669.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:651978-652697:- | gene-YJR135C_EthanolRed | rna-NM_001181793.1_EthanolRed | cds-NP_012669.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:663441-664160:- | gene-YJR135C_FaliES1 | rna-NM_001181793.1_FaliES1 | cds-NP_012669.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000054.1:24997-25716:+ | gene-YJR135C_JAY291 | rna-NM_001181793.1_JAY291 | cds-NP_012669.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:662318-663037:- | gene-YJR135C_MUCL30387 | rna-NM_001181793.1_MUCL30387 | cds-NP_012669.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:659802-660521:- | gene-YJR135C_MUCL30388 | rna-NM_001181793.1_MUCL30388 | cds-NP_012669.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:653086-653805:- | gene-YJR135C_MUCL39482 | rna-NM_001181793.1_MUCL39482 | cds-NP_012669.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:657823-658542:- | gene-YJR135C_MUCL42920 | rna-NM_001181793.1_MUCL42920 | cds-NP_012669.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:676038-676757:- | gene-YJR135C_NCIM3186 | rna-NM_001181793.1_NCIM3186 | cds-NP_012669.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:650635-651354:- | gene-YJR135C_NCYC1407 | rna-NM_001181793.1_NCYC1407 | cds-NP_012669.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:668825-669544:- | gene-YJR135C_PE2H3 | rna-NM_001181793.1_PE2H3 | cds-NP_012669.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:662514-663233:- | gene-YJR135C_PE2H4 | rna-NM_001181793.1_PE2H4 | cds-NP_012669.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:676059-676778:- | gene-YJR135C_S288C | rna-NM_001181793.1_S288C | cds-NP_012669.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000069.1:25349-26068:+ | gene-YJR135C_SA1 | rna-NM_001181793.1_SA1 | cds-NP_012669.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:657372-658091:- | gene-YJR135C_ThermosaccDry | rna-NM_001181793.1_ThermosaccDry | cds-NP_012669.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:659745-660464:- | gene-YJR135C_VR1 | rna-NM_001181793.1_VR1 | cds-NP_012669.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:636721-637440:- | gene-YJR135C_ZTW1 | rna-NM_001181793.1_ZTW1 | cds-NP_012669.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:671010-671729:- | gene-YJR135C_Sparadoxus | rna-NM_001181793.1_Sparadoxus | cds-NP_012669.1_Sparadoxus | 85.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |