Gene name: MCM2
Reference locus (S288C): YBL023C
Gene biotype: protein_coding
Description: Protein involved in DNA replication; component of the Mcm2-7 hexameric helicase complex that binds chromatin as a part of the pre-replicative complex; relative distribution to the nucleus increases upon DNA replication stress
Top 10 interactors (score): SLD5 (0.999); PSF1 (0.999); TOF1 (0.999); RFA1 (0.999); MCM5 (0.999); MCM3 (0.999); ORC6 (0.999); ORC1 (0.999); POL1 (0.999); PSF2 (0.999); MCM6 (0.999); ORC2 (0.999); CDC45 (0.999); MCM7 (0.999); DBF4 (0.999); MCM4 (0.999); ASF1 (0.999); ORC4 (0.999); ORC5 (0.999); CDC6 (0.999)
Homologues (species, bitscore): MCM2 (Homo sapiens, 785.4); Mcm2 (Mus musculus, 781.6); mcm2 (Danio rerio, 783.5); mcm2 (Xenopus tropicalis, 787.7); Mcm2 (Drosophila melanogaster, 752.7); mcm-2 (Caenorhabditis elegans, 699.9); MCM2 (Arabidopsis thaliana, 754.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:168530-171136:- | gene-YBL023C_AKU4011 | rna-NM_001178263.1_AKU4011 | cds-NP_009530.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:159358-161964:- | gene-YBL023C_BG1 | rna-NM_001178263.1_BG1 | cds-NP_009530.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:169116-171722:- | gene-YBL023C_Bruggeman | rna-NM_001178263.1_Bruggeman | cds-NP_009530.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:171727-174333:- | gene-YBL023C_CAT1 | rna-NM_001178263.1_CAT1 | cds-NP_009530.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:161085-163691:- | gene-YBL023C_CBS1585 | rna-NM_001178263.1_CBS1585 | cds-NP_009530.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:169540-172146:- | gene-YBL023C_CBS436 | rna-NM_001178263.1_CBS436 | cds-NP_009530.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:259864-262470:- | gene-YBL023C_CBS6412 | rna-NM_001178263.1_CBS6412 | cds-NP_009530.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:166655-169261:- | gene-YBL023C_CBS6413 | rna-NM_001178263.1_CBS6413 | cds-NP_009530.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:168685-171291:- | gene-YBL023C_CENPK1137D | rna-NM_001178263.1_CENPK1137D | cds-NP_009530.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:296072-298678:- | gene-YBL023C_EthanolRed | rna-NM_001178263.1_EthanolRed | cds-NP_009530.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:183338-185944:- | gene-YBL023C_FaliES1 | rna-NM_001178263.1_FaliES1 | cds-NP_009530.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000421.1:9009-11615:- | gene-YBL023C_JAY291 | rna-NM_001178263.1_JAY291 | cds-NP_009530.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:168973-171579:- | gene-YBL023C_MUCL30387 | rna-NM_001178263.1_MUCL30387 | cds-NP_009530.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:170015-172621:- | gene-YBL023C_MUCL30388 | rna-NM_001178263.1_MUCL30388 | cds-NP_009530.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:161270-163876:- | gene-YBL023C_MUCL39482 | rna-NM_001178263.1_MUCL39482 | cds-NP_009530.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:168545-171151:- | gene-YBL023C_MUCL42920 | rna-NM_001178263.1_MUCL42920 | cds-NP_009530.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:174717-177323:- | gene-YBL023C_NCIM3186 | rna-NM_001178263.1_NCIM3186 | cds-NP_009530.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:162419-165025:- | gene-YBL023C_NCYC1407 | rna-NM_001178263.1_NCYC1407 | cds-NP_009530.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:168646-171252:- | gene-YBL023C_PE2H3 | rna-NM_001178263.1_PE2H3 | cds-NP_009530.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:166290-168896:- | gene-YBL023C_PE2H4 | rna-NM_001178263.1_PE2H4 | cds-NP_009530.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:174920-177526:- | gene-YBL023C_S288C | rna-NM_001178263.1_S288C | cds-NP_009530.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000051.1:59641-62247:- | gene-YBL023C_SA1 | rna-NM_001178263.1_SA1 | cds-NP_009530.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:183293-185899:- | gene-YBL023C_ThermosaccDry | rna-NM_001178263.1_ThermosaccDry | cds-NP_009530.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:165459-168065:- | gene-YBL023C_VR1 | rna-NM_001178263.1_VR1 | cds-NP_009530.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:160005-162611:- | gene-YBL023C_ZTW1 | rna-NM_001178263.1_ZTW1 | cds-NP_009530.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:194961-197567:- | gene-YBL023C_Sparadoxus | rna-NM_001178263.1_Sparadoxus | cds-NP_009530.1_Sparadoxus | 91.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |