MCH2 (YKL221W)


Gene profile

Gene name: MCH2
Reference locus (S288C): YKL221W
Gene biotype: protein_coding

Description: Probable transporter MCH2; Protein with similarity to mammalian monocarboxylate permeases; monocarboxylate permeases are involved in transport of monocarboxylic acids across the plasma membrane but mutant is not deficient in monocarboxylate transport

Top 10 interactors (score): YKL222C (0.855); YMR230W-A (0.749); YKL223W (0.748); YHL048C-A (0.746); YHL046W-A (0.746); YHL041W (0.746); YGL258W-A (0.745); YHR214C-D (0.711); YHR214C-E (0.711); PAU16 (0.708); YPL278C (0.699); YKL225W (0.699); YHR213W-B (0.698); YHL045W (0.694); YLR173W (0.694); MCH1 (0.679); YHR213W-A (0.677); YHL044W (0.673); YHR214W-A (0.673); YAR066W (0.66)

Homologues (species, bitscore): SLC16A12 (Homo sapiens, 92.8); Slc16a12 (Mus musculus, 79.7); slc16a6a (Danio rerio, 96.7); slc16a5 (Xenopus tropicalis, 90.5); CG13907 (Drosophila melanogaster, 80.5); pes-22 (Caenorhabditis elegans, 82.8)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
BG1 GCA_001932575.1 Bioethanol South America MSHP01000195.1:11931-13352:- gene-YKL221W_BG1 rna-NM_001179786.2_BG1 cds-NP_012701.2_BG1 99.8 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005513.1:6858-8279:+ gene-YKL221W_Bruggeman rna-NM_001179786.2_Bruggeman cds-NP_012701.2_Bruggeman 99.7 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005529.1:4781-6202:+ gene-YKL221W_CAT1 rna-NM_001179786.2_CAT1 cds-NP_012701.2_CAT1 99.7 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005369.1:3944-5365:+ gene-YKL221W_CBS1585 rna-NM_001179786.2_CBS1585 cds-NP_012701.2_CBS1585 99.7 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005353.1:3673-5094:+ gene-YKL221W_CBS436 rna-NM_001179786.2_CBS436 cds-NP_012701.2_CBS436 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005321.1:4659-6080:+ gene-YKL221W_CBS6413 rna-NM_001179786.2_CBS6413 cds-NP_012701.2_CBS6413 99.7 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001532.1:5950-7371:+ gene-YKL221W_CENPK1137D rna-NM_001179786.2_CENPK1137D cds-NP_012701.2_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005481.1:4298-5719:+ gene-YKL221W_EthanolRed rna-NM_001179786.2_EthanolRed cds-NP_012701.2_EthanolRed 99.7 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005545.1:3940-5361:+ gene-YKL221W_FaliES1 rna-NM_001179786.2_FaliES1 cds-NP_012701.2_FaliES1 99.7 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000006.2:3621-5042:+ gene-YKL221W_JAY291 rna-NM_001179786.2_JAY291 cds-NP_012701.2_JAY291 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005417.1:6403-7824:+ gene-YKL221W_MUCL30387 rna-NM_001179786.2_MUCL30387 cds-NP_012701.2_MUCL30387 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005449.1:3993-5414:+ gene-YKL221W_MUCL30388 rna-NM_001179786.2_MUCL30388 cds-NP_012701.2_MUCL30388 99.7 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005289.1:4023-5444:+ gene-YKL221W_MUCL39482 rna-NM_001179786.2_MUCL39482 cds-NP_012701.2_MUCL39482 99.7 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005433.1:7773-9194:+ gene-YKL221W_MUCL42920 rna-NM_001179786.2_MUCL42920 cds-NP_012701.2_MUCL42920 99.8 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011820.1:6096-7517:+ gene-YKL221W_NCIM3186 rna-NM_001179786.2_NCIM3186 cds-NP_012701.2_NCIM3186 99.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005273.1:4057-5478:+ gene-YKL221W_NCYC1407 rna-NM_001179786.2_NCYC1407 cds-NP_012701.2_NCYC1407 99.7 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994150.1:12241-13662:+ gene-YKL221W_PE2H3 rna-NM_001179786.2_PE2H3 cds-NP_012701.2_PE2H3 99.7 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999882.1:8442-9863:+ gene-YKL221W_PE2H4 rna-NM_001179786.2_PE2H4 cds-NP_012701.2_PE2H4 99.7 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001143.9:6107-7528:+ gene-YKL221W_S288C rna-NM_001179786.2_S288C cds-NP_012701.2_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000125.1:4520-5940:- gene-YKL221W_SA1 rna-NM_001179786.2_SA1 cds-NP_012701.2_SA1 99.7 99.9 Unannotated 1 1 0 False False False True False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005497.1:4677-6098:+ gene-YKL221W_ThermosaccDry rna-NM_001179786.2_ThermosaccDry cds-NP_012701.2_ThermosaccDry 99.7 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005465.1:3613-5034:+ gene-YKL221W_VR1 rna-NM_001179786.2_VR1 cds-NP_012701.2_VR1 99.8 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000022.1:3620-5041:+ gene-YKL221W_ZTW1 rna-NM_001179786.2_ZTW1 cds-NP_012701.2_ZTW1 99.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047497.1:12577-13998:+ gene-YKL221W_Sparadoxus rna-NM_001179786.2_Sparadoxus cds-NP_012701.2_Sparadoxus 89.2 100.0 Verified 1 1 1 False True False False False

Additional files