Gene name: MCD4
Reference locus (S288C): YKL165C
Gene biotype: protein_coding
Description: Mannose-ethanolamine phosphotransferase mcd4; GPI ethanolamine phosphate transferase 1; Protein involved in GPI anchor synthesis; multimembrane-spanning protein that localizes to the endoplasmic reticulum; highly conserved among eukaryotes; GPI stands for glycosylphosphatidylinositol
Top 10 interactors (score): GPI10 (0.998); GPI18 (0.989); GWT1 (0.966); GPI11 (0.961); SPT14 (0.908); GPI12 (0.872); GPI1 (0.852); CWH43 (0.805); PER1 (0.79); CDC1 (0.785); SMP3 (0.781); GPI16 (0.77); GPI14 (0.763); MAN2 (0.745); YJR011C (0.745); TRP3 (0.733); MSC2 (0.708); BST1 (0.691); SKI6 (0.689); DCW1 (0.688)
Homologues (species, bitscore): PIGN (Homo sapiens, 578.9); Pign (Mus musculus, 568.9); pign (Danio rerio, 567.0); PIGN (Xenopus tropicalis, 547.7); CG2292 (Drosophila melanogaster, 365.2); pign-1 (Caenorhabditis elegans, 367.9); AT3G01380 (Arabidopsis thaliana, 545.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:124785-127544:- | gene-YKL165C_AKU4011 | rna-NM_001179731.1_AKU4011 | cds-NP_012756.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:101340-104099:- | gene-YKL165C_BG1 | rna-NM_001179731.1_BG1 | cds-NP_012756.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:142179-144938:- | gene-YKL165C_Bruggeman | rna-NM_001179731.1_Bruggeman | cds-NP_012756.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:137133-139892:- | gene-YKL165C_CAT1 | rna-NM_001179731.1_CAT1 | cds-NP_012756.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:136769-139528:- | gene-YKL165C_CBS1585 | rna-NM_001179731.1_CBS1585 | cds-NP_012756.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:135529-138288:- | gene-YKL165C_CBS436 | rna-NM_001179731.1_CBS436 | cds-NP_012756.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:122363-125122:- | gene-YKL165C_CBS6412 | rna-NM_001179731.1_CBS6412 | cds-NP_012756.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:137485-140244:- | gene-YKL165C_CBS6413 | rna-NM_001179731.1_CBS6413 | cds-NP_012756.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:137742-140501:- | gene-YKL165C_CENPK1137D | rna-NM_001179731.1_CENPK1137D | cds-NP_012756.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:135682-138441:- | gene-YKL165C_EthanolRed | rna-NM_001179731.1_EthanolRed | cds-NP_012756.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:136383-139142:- | gene-YKL165C_FaliES1 | rna-NM_001179731.1_FaliES1 | cds-NP_012756.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000006.2:135351-138110:- | gene-YKL165C_JAY291 | rna-NM_001179731.1_JAY291 | cds-NP_012756.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:144470-147229:- | gene-YKL165C_MUCL30387 | rna-NM_001179731.1_MUCL30387 | cds-NP_012756.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:138823-141582:- | gene-YKL165C_MUCL30388 | rna-NM_001179731.1_MUCL30388 | cds-NP_012756.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:136824-139583:- | gene-YKL165C_MUCL39482 | rna-NM_001179731.1_MUCL39482 | cds-NP_012756.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:141155-143914:- | gene-YKL165C_MUCL42920 | rna-NM_001179731.1_MUCL42920 | cds-NP_012756.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:137921-140680:- | gene-YKL165C_NCIM3186 | rna-NM_001179731.1_NCIM3186 | cds-NP_012756.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:136848-139607:- | gene-YKL165C_NCYC1407 | rna-NM_001179731.1_NCYC1407 | cds-NP_012756.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:143906-146665:- | gene-YKL165C_PE2H3 | rna-NM_001179731.1_PE2H3 | cds-NP_012756.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:140200-142959:- | gene-YKL165C_PE2H4 | rna-NM_001179731.1_PE2H4 | cds-NP_012756.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:137932-140691:- | gene-YKL165C_S288C | rna-NM_001179731.1_S288C | cds-NP_012756.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:54130-56889:- | gene-YKL165C_SA1 | rna-NM_001179731.1_SA1 | cds-NP_012756.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:137083-139842:- | gene-YKL165C_ThermosaccDry | rna-NM_001179731.1_ThermosaccDry | cds-NP_012756.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:135609-138368:- | gene-YKL165C_VR1 | rna-NM_001179731.1_VR1 | cds-NP_012756.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:135821-138580:- | gene-YKL165C_ZTW1 | rna-NM_001179731.1_ZTW1 | cds-NP_012756.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:150119-152878:- | gene-YKL165C_Sparadoxus | rna-NM_001179731.1_Sparadoxus | cds-NP_012756.1_Sparadoxus | 90.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |