MBP1 (YDL056W)


Gene profile

Gene name: MBP1
Reference locus (S288C): YDL056W
Gene biotype: protein_coding

Description: Transcription factor mbp1; Transcription factor; involved in regulation of cell cycle progression from G1 to S phase, forms a complex with Swi6p that binds to MluI cell cycle box regulatory element in promoters of DNA synthesis genes

Top 10 interactors (score): SWI6 (0.999); STB1 (0.995); NRM1 (0.994); WHI5 (0.979); SWI4 (0.973); MCM1 (0.963); CDC28 (0.953); SWI5 (0.945); CLN3 (0.943); FKH1 (0.929); FKH2 (0.925); ACE2 (0.925); SKN7 (0.92); NDD1 (0.89); CLB2 (0.889); YOX1 (0.872); CLB6 (0.862); XBP1 (0.855); CLB1 (0.854); BCK2 (0.85)

Homologues (species, bitscore): DAPK1 (Homo sapiens, 59.3); Dapk1 (Mus musculus, 56.2); dapk1 (Danio rerio, 58.2); dapk1 (Xenopus tropicalis, 56.2); Ank2 (Drosophila melanogaster, 52.8)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:337445-339946:+ gene-YDL056W_AKU4011 rna-NM_001180115.1_AKU4011 cds-NP_010227.1_AKU4011 99.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000102.1:210071-212572:- gene-YDL056W_BG1 rna-NM_001180115.1_BG1 cds-NP_010227.1_BG1 99.9 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:355264-357765:+ gene-YDL056W_Bruggeman rna-NM_001180115.1_Bruggeman cds-NP_010227.1_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:351616-354117:+ gene-YDL056W_CAT1 rna-NM_001180115.1_CAT1 cds-NP_010227.1_CAT1 99.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:335723-338224:+ gene-YDL056W_CBS1585 rna-NM_001180115.1_CBS1585 cds-NP_010227.1_CBS1585 99.6 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:352429-354930:+ gene-YDL056W_CBS436 rna-NM_001180115.1_CBS436 cds-NP_010227.1_CBS436 99.9 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:333793-336294:+ gene-YDL056W_CBS6412 rna-NM_001180115.1_CBS6412 cds-NP_010227.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:353809-356310:+ gene-YDL056W_CBS6413 rna-NM_001180115.1_CBS6413 cds-NP_010227.1_CBS6413 99.5 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:351697-354198:+ gene-YDL056W_CENPK1137D rna-NM_001180115.1_CENPK1137D cds-NP_010227.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:348275-350776:+ gene-YDL056W_EthanolRed rna-NM_001180115.1_EthanolRed cds-NP_010227.1_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:354522-357023:+ gene-YDL056W_FaliES1 rna-NM_001180115.1_FaliES1 cds-NP_010227.1_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000240.1:8874-11375:+ gene-YDL056W_JAY291 rna-NM_001180115.1_JAY291 cds-NP_010227.1_JAY291 99.9 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:352655-355156:+ gene-YDL056W_MUCL30387 rna-NM_001180115.1_MUCL30387 cds-NP_010227.1_MUCL30387 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:343781-346282:+ gene-YDL056W_MUCL30388 rna-NM_001180115.1_MUCL30388 cds-NP_010227.1_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:336834-339335:+ gene-YDL056W_MUCL39482 rna-NM_001180115.1_MUCL39482 cds-NP_010227.1_MUCL39482 99.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:258851-261352:+ gene-YDL056W_MUCL42920 rna-NM_001180115.1_MUCL42920 cds-NP_010227.1_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:352800-355301:+ gene-YDL056W_NCIM3186 rna-NM_001180115.1_NCIM3186 cds-NP_010227.1_NCIM3186 99.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:336831-339332:+ gene-YDL056W_NCYC1407 rna-NM_001180115.1_NCYC1407 cds-NP_010227.1_NCYC1407 99.6 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:343659-346160:+ gene-YDL056W_PE2H3 rna-NM_001180115.1_PE2H3 cds-NP_010227.1_PE2H3 99.9 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:343659-346160:+ gene-YDL056W_PE2H4 rna-NM_001180115.1_PE2H4 cds-NP_010227.1_PE2H4 99.9 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:352877-355378:+ gene-YDL056W_S288C rna-NM_001180115.1_S288C cds-NP_010227.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000010.1:79556-82057:- gene-YDL056W_SA1 rna-NM_001180115.1_SA1 cds-NP_010227.1_SA1 99.2 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:353974-356475:+ gene-YDL056W_ThermosaccDry rna-NM_001180115.1_ThermosaccDry cds-NP_010227.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:356547-359048:+ gene-YDL056W_VR1 rna-NM_001180115.1_VR1 cds-NP_010227.1_VR1 99.9 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000006.1:351908-354409:+ gene-YDL056W_ZTW1 rna-NM_001180115.1_ZTW1 cds-NP_010227.1_ZTW1 99.5 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:354089-356611:+ gene-YDL056W_Sparadoxus rna-NM_001180115.1_Sparadoxus cds-NP_010227.1_Sparadoxus 88.8 99.9 Verified 1 1 1 False True False False False

Additional files