Gene name: MATALPHA2
Reference locus (S288C): YCR039C
Gene biotype: protein_coding
Description: Silenced mating-type protein ALPHA2; Homeobox-domain protein; with Mcm1p, represses a-specific genes in haploids; acts with A1p to repress transcription of haploid-specific genes in diploids; one of two genes encoded by the MATalpha mating type cassette
Top 10 interactors (score): MCM1 (0.993); HMRA1 (0.983); MATALPHA1 (0.945); HMLALPHA1 (0.945); DEG1 (0.843); SSM4 (0.823); HMRA2 (0.802); HMLALPHA2 (0.802); STE6 (0.78); MDR1 (0.78); RME1 (0.767); IME1 (0.746); SIR4 (0.713); HRD1 (0.713); FYV5 (0.713); YMR090W (0.712); STE2 (0.712); SIR2 (0.711); UBC6 (0.698); STE3 (0.696)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:189314-189945:- | gene-YCR039C_Bruggeman | rna-NM_001178753.1_Bruggeman | cds-NP_009868.3_Bruggeman | 79.4 | 99.8 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:201088-201719:- | gene-YCR039C_CAT1 | rna-NM_001178753.1_CAT1 | cds-NP_009868.3_CAT1 | 79.7 | 99.8 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:2394-2707:- | gene-YCR039C_CBS6412 | rna-NM_001178753.1_CBS6412 | cds-NP_009868.3_CBS6412 | 49.6 | 49.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:288573-289164:- | gene-YCR039C_CBS6413 | rna-NM_001178753.1_CBS6413 | cds-NP_009868.3_CBS6413 | 56.3 | 93.5 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | JH711465.1:1-74:- | gene-YCR039C_CENPK1137D | rna-NM_001178753.1_CENPK1137D | cds-NP_009868.3_CENPK1137D | 11.6 | 11.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:11915-12541:- | gene-YCR039C_EthanolRed | rna-NM_001178753.1_EthanolRed | cds-NP_009868.3_EthanolRed | 55.2 | 94.4 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:290311-290902:- | gene-YCR039C_FaliES1 | rna-NM_001178753.1_FaliES1 | cds-NP_009868.3_FaliES1 | 56.3 | 93.5 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:186553-187184:- | gene-YCR039C_MUCL30387 | rna-NM_001178753.1_MUCL30387 | cds-NP_009868.3_MUCL30387 | 64.4 | 99.8 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:186344-186975:- | gene-YCR039C_MUCL30388 | rna-NM_001178753.1_MUCL30388 | cds-NP_009868.3_MUCL30388 | 79.4 | 99.8 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:289518-290109:- | gene-YCR039C_MUCL39482 | rna-NM_001178753.1_MUCL39482 | cds-NP_009868.3_MUCL39482 | 56.3 | 93.5 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:191907-192498:- | gene-YCR039C_MUCL42920 | rna-NM_001178753.1_MUCL42920 | cds-NP_009868.3_MUCL42920 | 71.4 | 93.5 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:12018-12650:- | gene-YCR039C_NCIM3186 | rna-NM_001178753.1_NCIM3186 | cds-NP_009868.3_NCIM3186 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:204911-205543:- | gene-YCR039C_PE2H3 | rna-NM_001178753.1_PE2H3 | cds-NP_009868.3_PE2H3 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:12754-13386:- | gene-YCR039C_PE2H4 | rna-NM_001178753.1_PE2H4 | cds-NP_009868.3_PE2H4 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:199546-200178:- | gene-YCR039C_S288C | rna-NM_001178753.1_S288C | cds-NP_009868.3_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000061.1:1-166:- | gene-YCR039C_SA1 | rna-NM_001178753.1_SA1 | cds-NP_009868.3_SA1 | 26.2 | 26.2 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:289827-290418:- | gene-YCR039C_ThermosaccDry | rna-NM_001178753.1_ThermosaccDry | cds-NP_009868.3_ThermosaccDry | 56.3 | 93.5 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:206267-206580:- | gene-YCR039C_VR1 | rna-NM_001178753.1_VR1 | cds-NP_009868.3_VR1 | 49.6 | 49.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:192933-193565:- | gene-YCR039C_ZTW1 | rna-NM_001178753.1_ZTW1 | cds-NP_009868.3_ZTW1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:42785-43417:- | gene-YCR039C_Sparadoxus | rna-NM_001178753.1_Sparadoxus | cds-NP_009868.3_Sparadoxus | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |