Gene name: MATALPHA1
Reference locus (S288C): YCR040W
Gene biotype: protein_coding
Description: Silenced mating-type protein ALPHA1; Transcriptional co-activator that regulates mating-type-specific genes; targets the transcription factor Mcm1p to the promoters of alpha-specific genes; one of two genes encoded by the MATalpha mating type cassette
Top 10 interactors (score): HMRA1 (0.957); HMLALPHA2 (0.945); MATALPHA2 (0.945); HMRA2 (0.92); MCM1 (0.862); STE3 (0.783); MF(ALPHA)1 (0.771); STE2 (0.749); SIR4 (0.698); YCR097W-A (0.696); TAF2 (0.694); RME1 (0.678); MFA1 (0.673); SIR2 (0.671); STE12 (0.651); SIR3 (0.651); SIR1 (0.575); MF(ALPHA)2 (0.575); YCL068C (0.572); DIC1 (0.57)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:194670-195197:+ | gene-YCR040W_AKU4011 | rna-NM_001178754.1_AKU4011 | cds-NP_009869.3_AKU4011 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000067.1:48399-48926:+ | gene-YCR040W_BG1 | rna-NM_001178754.1_BG1 | cds-NP_009869.3_BG1 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:201983-202510:+ | gene-YCR040W_CAT1 | rna-NM_001178754.1_CAT1 | cds-NP_009869.3_CAT1 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:189431-189958:+ | gene-YCR040W_CBS1585 | rna-NM_001178754.1_CBS1585 | cds-NP_009869.3_CBS1585 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:201078-201605:+ | gene-YCR040W_CBS436 | rna-NM_001178754.1_CBS436 | cds-NP_009869.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:195608-196135:+ | gene-YCR040W_CBS6413 | rna-NM_001178754.1_CBS6413 | cds-NP_009869.3_CBS6413 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | JH711465.1:338-746:+ | gene-YCR040W_CENPK1137D | rna-NM_001178754.1_CENPK1137D | cds-NP_009869.3_CENPK1137D | 77.4 | 77.4 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:195547-196074:+ | gene-YCR040W_FaliES1 | rna-NM_001178754.1_FaliES1 | cds-NP_009869.3_FaliES1 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:195755-196282:+ | gene-YCR040W_MUCL39482 | rna-NM_001178754.1_MUCL39482 | cds-NP_009869.3_MUCL39482 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000159.1:292-819:- | gene-YCR040W_MUCL42920 | rna-NM_001178754.1_MUCL42920 | cds-NP_009869.3_MUCL42920 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:200074-200601:+ | gene-YCR040W_NCIM3186 | rna-NM_001178754.1_NCIM3186 | cds-NP_009869.3_NCIM3186 | 57.5 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:205806-206333:+ | gene-YCR040W_PE2H3 | rna-NM_001178754.1_PE2H3 | cds-NP_009869.3_PE2H3 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:13650-14177:+ | gene-YCR040W_PE2H4 | rna-NM_001178754.1_PE2H4 | cds-NP_009869.3_PE2H4 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:200442-200969:+ | gene-YCR040W_S288C | rna-NM_001178754.1_S288C | cds-NP_009869.3_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000061.1:430-957:+ | gene-YCR040W_SA1 | rna-NM_001178754.1_SA1 | cds-NP_009869.3_SA1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:206844-207371:+ | gene-YCR040W_VR1 | rna-NM_001178754.1_VR1 | cds-NP_009869.3_VR1 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:193829-194356:+ | gene-YCR040W_ZTW1 | rna-NM_001178754.1_ZTW1 | cds-NP_009869.3_ZTW1 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:227965-228489:+ | gene-YCR040W_Sparadoxus | rna-NM_001178754.1_Sparadoxus | cds-NP_009869.3_Sparadoxus | 90.7 | 99.4 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |