Gene name: MAP1
Reference locus (S288C): YLR244C
Gene biotype: protein_coding
Description: Methionine aminopeptidase; catalyzes the cotranslational removal of N-terminal methionine from nascent polypeptides; function is partially redundant with that of Map2p
Top 10 interactors (score): MAP2 (0.999); YNR029C (0.979); ARD1 (0.964); NAT5 (0.932); NAT1 (0.928); YHR112C (0.901); RPL35B (0.765); RPL31A (0.721); RPL35A (0.717); TCP1 (0.717); SRP54 (0.684); AIM26 (0.679); PUF3 (0.671); YTM1 (0.66); NMT1 (0.656); LEU9 (0.652); LEU4 (0.652); ARX1 (0.651); ATC1 (0.65); BNA4 (0.647)
Homologues (species, bitscore): METAP1 (Homo sapiens, 383.3); Metap1 (Mus musculus, 380.6); metap1 (Danio rerio, 392.9); metap1 (Xenopus tropicalis, 361.7); CG13630 (Drosophila melanogaster, 357.1); map-1 (Caenorhabditis elegans, 353.2); MAP1A (Arabidopsis thaliana, 381.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:579379-580542:- | gene-YLR244C_AKU4011 | rna-NM_001182131.1_AKU4011 | cds-NP_013345.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:151368-152531:+ | gene-YLR244C_BG1 | rna-NM_001182131.1_BG1 | cds-NP_013345.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:613616-614779:- | gene-YLR244C_Bruggeman | rna-NM_001182131.1_Bruggeman | cds-NP_013345.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:612740-613903:- | gene-YLR244C_CAT1 | rna-NM_001182131.1_CAT1 | cds-NP_013345.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:614874-616037:- | gene-YLR244C_CBS1585 | rna-NM_001182131.1_CBS1585 | cds-NP_013345.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:599081-600244:- | gene-YLR244C_CBS436 | rna-NM_001182131.1_CBS436 | cds-NP_013345.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:577849-579012:- | gene-YLR244C_CBS6412 | rna-NM_001182131.1_CBS6412 | cds-NP_013345.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:615169-616332:- | gene-YLR244C_CBS6413 | rna-NM_001182131.1_CBS6413 | cds-NP_013345.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:609779-610942:- | gene-YLR244C_CENPK1137D | rna-NM_001182131.1_CENPK1137D | cds-NP_013345.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:572913-574076:- | gene-YLR244C_EthanolRed | rna-NM_001182131.1_EthanolRed | cds-NP_013345.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:601838-603001:- | gene-YLR244C_FaliES1 | rna-NM_001182131.1_FaliES1 | cds-NP_013345.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000136.1:55888-57051:+ | gene-YLR244C_JAY291 | rna-NM_001182131.1_JAY291 | cds-NP_013345.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:614472-615635:- | gene-YLR244C_MUCL30387 | rna-NM_001182131.1_MUCL30387 | cds-NP_013345.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:618594-619757:- | gene-YLR244C_MUCL30388 | rna-NM_001182131.1_MUCL30388 | cds-NP_013345.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:615855-617018:- | gene-YLR244C_MUCL39482 | rna-NM_001182131.1_MUCL39482 | cds-NP_013345.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:610615-611778:- | gene-YLR244C_MUCL42920 | rna-NM_001182131.1_MUCL42920 | cds-NP_013345.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:625142-626305:- | gene-YLR244C_NCIM3186 | rna-NM_001182131.1_NCIM3186 | cds-NP_013345.1_NCIM3186 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:602841-604004:- | gene-YLR244C_NCYC1407 | rna-NM_001182131.1_NCYC1407 | cds-NP_013345.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:606559-607722:- | gene-YLR244C_PE2H3 | rna-NM_001182131.1_PE2H3 | cds-NP_013345.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:606303-607466:- | gene-YLR244C_PE2H4 | rna-NM_001182131.1_PE2H4 | cds-NP_013345.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:625168-626331:- | gene-YLR244C_S288C | rna-NM_001182131.1_S288C | cds-NP_013345.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000013.1:56138-57301:+ | gene-YLR244C_SA1 | rna-NM_001182131.1_SA1 | cds-NP_013345.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:604338-605501:- | gene-YLR244C_ThermosaccDry | rna-NM_001182131.1_ThermosaccDry | cds-NP_013345.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:615673-616836:- | gene-YLR244C_VR1 | rna-NM_001182131.1_VR1 | cds-NP_013345.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:128653-129816:- | gene-YLR244C_ZTW1 | rna-NM_001182131.1_ZTW1 | cds-NP_013345.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:589842-591005:- | gene-YLR244C_Sparadoxus | rna-NM_001182131.1_Sparadoxus | cds-NP_013345.1_Sparadoxus | 90.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |