MAM3 (YOL060C)


Gene profile

Gene name: MAM3
Reference locus (S288C): YOL060C
Gene biotype: protein_coding

Description: Metal transporter cnnm; Protein required for normal mitochondrial morphology; has similarity to hemolysins

Top 10 interactors (score): SRV2 (0.895); GLT1 (0.891); PDE2 (0.885); CMP2 (0.883); CNA1 (0.883); PAH1 (0.835); ENV9 (0.759); MPD1 (0.724); ENV11 (0.716); ENV10 (0.715); ENV7 (0.671); EAR1 (0.671); PPE1 (0.671); PAU3 (0.658); HAP5 (0.649); GSF2 (0.631); CCW14 (0.612); GYP8 (0.6); ATG4 (0.596); DOS2 (0.588)

Homologues (species, bitscore): CNNM2 (Homo sapiens, 248.1); Cnnm2 (Mus musculus, 247.7); LOC793848 (Danio rerio, 248.1); cnnm2 (Xenopus tropicalis, 243.4); uex (Drosophila melanogaster, 225.3); cnnm-1 (Caenorhabditis elegans, 193.0); AT5G52790 (Arabidopsis thaliana, 239.6)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:197670-199790:- gene-YOL060C_AKU4011 rna-NM_001183315.1_AKU4011 cds-NP_014581.1_AKU4011 99.2 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000152.1:13540-15660:- gene-YOL060C_BG1 rna-NM_001183315.1_BG1 cds-NP_014581.1_BG1 99.6 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:199338-201458:- gene-YOL060C_Bruggeman rna-NM_001183315.1_Bruggeman cds-NP_014581.1_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:198853-200973:- gene-YOL060C_CAT1 rna-NM_001183315.1_CAT1 cds-NP_014581.1_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:192061-194181:- gene-YOL060C_CBS1585 rna-NM_001183315.1_CBS1585 cds-NP_014581.1_CBS1585 99.2 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:197223-199343:- gene-YOL060C_CBS436 rna-NM_001183315.1_CBS436 cds-NP_014581.1_CBS436 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:191990-194110:- gene-YOL060C_CBS6412 rna-NM_001183315.1_CBS6412 cds-NP_014581.1_CBS6412 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:198926-201046:- gene-YOL060C_CBS6413 rna-NM_001183315.1_CBS6413 cds-NP_014581.1_CBS6413 99.2 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:213766-215886:- gene-YOL060C_CENPK1137D rna-NM_001183315.1_CENPK1137D cds-NP_014581.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:194770-196890:- gene-YOL060C_EthanolRed rna-NM_001183315.1_EthanolRed cds-NP_014581.1_EthanolRed 99.2 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:197313-199433:- gene-YOL060C_FaliES1 rna-NM_001183315.1_FaliES1 cds-NP_014581.1_FaliES1 99.2 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000018.1:66126-68246:+ gene-YOL060C_JAY291 rna-NM_001183315.1_JAY291 cds-NP_014581.1_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:203103-205223:- gene-YOL060C_MUCL30387 rna-NM_001183315.1_MUCL30387 cds-NP_014581.1_MUCL30387 99.2 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:206787-208907:- gene-YOL060C_MUCL30388 rna-NM_001183315.1_MUCL30388 cds-NP_014581.1_MUCL30388 99.6 100.0 Unannotated 1 1 0 False False False False True
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:199981-202101:- gene-YOL060C_MUCL39482 rna-NM_001183315.1_MUCL39482 cds-NP_014581.1_MUCL39482 99.2 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:215460-217580:- gene-YOL060C_MUCL42920 rna-NM_001183315.1_MUCL42920 cds-NP_014581.1_MUCL42920 99.3 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:213906-216026:- gene-YOL060C_NCIM3186 rna-NM_001183315.1_NCIM3186 cds-NP_014581.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:206598-208718:- gene-YOL060C_NCYC1407 rna-NM_001183315.1_NCYC1407 cds-NP_014581.1_NCYC1407 99.3 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:189604-191724:- gene-YOL060C_PE2H3 rna-NM_001183315.1_PE2H3 cds-NP_014581.1_PE2H3 99.6 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:200594-202714:- gene-YOL060C_PE2H4 rna-NM_001183315.1_PE2H4 cds-NP_014581.1_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:214017-216137:- gene-YOL060C_S288C rna-NM_001183315.1_S288C cds-NP_014581.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000001.1:181952-184072:- gene-YOL060C_SA1 rna-NM_001183315.1_SA1 cds-NP_014581.1_SA1 99.3 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:196321-198441:- gene-YOL060C_ThermosaccDry rna-NM_001183315.1_ThermosaccDry cds-NP_014581.1_ThermosaccDry 99.2 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:197084-199204:- gene-YOL060C_VR1 rna-NM_001183315.1_VR1 cds-NP_014581.1_VR1 99.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000031.1:195963-198083:- gene-YOL060C_ZTW1 rna-NM_001183315.1_ZTW1 cds-NP_014581.1_ZTW1 99.2 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:199485-201605:- gene-YOL060C_Sparadoxus rna-NM_001183315.1_Sparadoxus cds-NP_014581.1_Sparadoxus 90.2 100.0 Verified 1 1 1 False True False False False

Additional files