Gene name: LYP1
Reference locus (S288C): YNL268W
Gene biotype: protein_coding
Description: Yeast amino acid transporter; Lysine permease; one of three amino acid permeases (Alp1p, Can1p, Lyp1p) responsible for uptake of cationic amino acids
Top 10 interactors (score): MUP1 (0.82); LDB19 (0.798); URA4 (0.787); URA2 (0.773); LYS2 (0.761); PML39 (0.728); FUR4 (0.689); RSP5 (0.642); URA3 (0.62); BUL1 (0.594); PRP28 (0.59); SNU56 (0.585); VBA3 (0.578); LEU2 (0.575); ASI2 (0.574); CPS1 (0.556); NPR1 (0.525); URA5 (0.525); FUI1 (0.524); DIP5 (0.504)
Homologues (species, bitscore): SLC7A8 (Homo sapiens, 51.6); Slc7a8 (Mus musculus, 52.4); slc7a10a (Danio rerio, 58.2); slc7a8 (Xenopus tropicalis, 53.9); aat-6 (Caenorhabditis elegans, 58.9); At5g36940 (Arabidopsis thaliana, 54.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:132382-134217:+ | gene-YNL268W_AKU4011 | rna-NM_001183106.1_AKU4011 | cds-NP_014131.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:36343-38178:+ | gene-YNL268W_BG1 | rna-NM_001183106.1_BG1 | cds-NP_014131.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:142146-143981:+ | gene-YNL268W_Bruggeman | rna-NM_001183106.1_Bruggeman | cds-NP_014131.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:145858-147693:+ | gene-YNL268W_CAT1 | rna-NM_001183106.1_CAT1 | cds-NP_014131.1_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:132782-134617:+ | gene-YNL268W_CBS1585 | rna-NM_001183106.1_CBS1585 | cds-NP_014131.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:127824-129659:+ | gene-YNL268W_CBS436 | rna-NM_001183106.1_CBS436 | cds-NP_014131.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:129194-131029:+ | gene-YNL268W_CBS6412 | rna-NM_001183106.1_CBS6412 | cds-NP_014131.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:129475-131310:+ | gene-YNL268W_CBS6413 | rna-NM_001183106.1_CBS6413 | cds-NP_014131.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:132427-134262:+ | gene-YNL268W_CENPK1137D | rna-NM_001183106.1_CENPK1137D | cds-NP_014131.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:130028-131863:+ | gene-YNL268W_EthanolRed | rna-NM_001183106.1_EthanolRed | cds-NP_014131.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:124765-126600:+ | gene-YNL268W_FaliES1 | rna-NM_001183106.1_FaliES1 | cds-NP_014131.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000082.1:35943-37778:+ | gene-YNL268W_JAY291 | rna-NM_001183106.1_JAY291 | cds-NP_014131.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:137687-139522:+ | gene-YNL268W_MUCL30387 | rna-NM_001183106.1_MUCL30387 | cds-NP_014131.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:135751-137586:+ | gene-YNL268W_MUCL30388 | rna-NM_001183106.1_MUCL30388 | cds-NP_014131.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:130272-132107:+ | gene-YNL268W_MUCL39482 | rna-NM_001183106.1_MUCL39482 | cds-NP_014131.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:132485-134320:+ | gene-YNL268W_MUCL42920 | rna-NM_001183106.1_MUCL42920 | cds-NP_014131.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:138519-140354:+ | gene-YNL268W_NCIM3186 | rna-NM_001183106.1_NCIM3186 | cds-NP_014131.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:132373-134208:+ | gene-YNL268W_NCYC1407 | rna-NM_001183106.1_NCYC1407 | cds-NP_014131.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:129279-131114:+ | gene-YNL268W_PE2H3 | rna-NM_001183106.1_PE2H3 | cds-NP_014131.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:128667-130502:+ | gene-YNL268W_PE2H4 | rna-NM_001183106.1_PE2H4 | cds-NP_014131.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:138550-140385:+ | gene-YNL268W_S288C | rna-NM_001183106.1_S288C | cds-NP_014131.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000034.1:36011-37846:+ | gene-YNL268W_SA1 | rna-NM_001183106.1_SA1 | cds-NP_014131.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:125622-127457:+ | gene-YNL268W_ThermosaccDry | rna-NM_001183106.1_ThermosaccDry | cds-NP_014131.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:144478-146313:+ | gene-YNL268W_VR1 | rna-NM_001183106.1_VR1 | cds-NP_014131.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:35958-37793:+ | gene-YNL268W_ZTW1 | rna-NM_001183106.1_ZTW1 | cds-NP_014131.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:135846-137684:+ | gene-YNL268W_Sparadoxus | rna-NM_001183106.1_Sparadoxus | cds-NP_014131.1_Sparadoxus | 90.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |