Gene name: LTE1
Reference locus (S288C): YAL024C
Gene biotype: protein_coding
Description: Guanine nucleotide exchange factor LTE1; Protein similar to GDP/GTP exchange factors; without detectable GEF activity; required for asymmetric localization of Bfa1p at daughter-directed spindle pole bodies and for mitotic exit at low temperatures
Top 10 interactors (score): KEL1 (0.999); TEM1 (0.999); BUB2 (0.991); BFA1 (0.985); KIN4 (0.983); CDC14 (0.982); CDC15 (0.98); RAS2 (0.976); SPO12 (0.975); DBF2 (0.952); CLB2 (0.941); CDC5 (0.94); SLK19 (0.939); MOB1 (0.938); CDC42 (0.935); CDC28 (0.932); STE20 (0.922); KEL2 (0.906); RSR1 (0.89); PIN3 (0.863)
Homologues (species, bitscore): RASGRF1 (Homo sapiens, 82.8); Rasgrf1 (Mus musculus, 78.2); RASGRF1 (Danio rerio, 79.3); rasgrf1 (Xenopus tropicalis, 82.8); Epac (Drosophila melanogaster, 70.5); pxf-1 (Caenorhabditis elegans, 68.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005295.1:86690-90997:- | gene-YAL024C_AKU4011 | rna-NM_001178169.1_AKU4011 | cds-NP_009378.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000070.1:73635-77942:- | gene-YAL024C_BG1 | rna-NM_001178169.1_BG1 | cds-NP_009378.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005503.1:101561-105868:- | gene-YAL024C_Bruggeman | rna-NM_001178169.1_Bruggeman | cds-NP_009378.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005519.1:87895-92202:- | gene-YAL024C_CAT1 | rna-NM_001178169.1_CAT1 | cds-NP_009378.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005359.1:99709-104016:- | gene-YAL024C_CBS1585 | rna-NM_001178169.1_CBS1585 | cds-NP_009378.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:99957-104264:- | gene-YAL024C_CBS436 | rna-NM_001178169.1_CBS436 | cds-NP_009378.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:712805-717112:- | gene-YAL024C_CBS6412 | rna-NM_001178169.1_CBS6412 | cds-NP_009378.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005311.1:97972-102279:- | gene-YAL024C_CBS6413 | rna-NM_001178169.1_CBS6413 | cds-NP_009378.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001522.1:101689-105996:- | gene-YAL024C_CENPK1137D | rna-NM_001178169.1_CENPK1137D | cds-NP_009378.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005471.1:88113-92420:- | gene-YAL024C_EthanolRed | rna-NM_001178169.1_EthanolRed | cds-NP_009378.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005535.1:102737-107044:- | gene-YAL024C_FaliES1 | rna-NM_001178169.1_FaliES1 | cds-NP_009378.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000084.1:74009-78316:- | gene-YAL024C_JAY291 | rna-NM_001178169.1_JAY291 | cds-NP_009378.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005407.1:102676-106983:- | gene-YAL024C_MUCL30387 | rna-NM_001178169.1_MUCL30387 | cds-NP_009378.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005439.1:99211-103518:- | gene-YAL024C_MUCL30388 | rna-NM_001178169.1_MUCL30388 | cds-NP_009378.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005279.1:98491-102798:- | gene-YAL024C_MUCL39482 | rna-NM_001178169.1_MUCL39482 | cds-NP_009378.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005423.1:100873-105180:- | gene-YAL024C_MUCL42920 | rna-NM_001178169.1_MUCL42920 | cds-NP_009378.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:101442-105749:- | gene-YAL024C_NCIM3186 | rna-NM_001178169.1_NCIM3186 | cds-NP_009378.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005263.1:86380-90687:- | gene-YAL024C_NCYC1407 | rna-NM_001178169.1_NCYC1407 | cds-NP_009378.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:88283-92590:- | gene-YAL024C_PE2H3 | rna-NM_001178169.1_PE2H3 | cds-NP_009378.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:88002-92309:- | gene-YAL024C_PE2H4 | rna-NM_001178169.1_PE2H4 | cds-NP_009378.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:101565-105872:- | gene-YAL024C_S288C | rna-NM_001178169.1_S288C | cds-NP_009378.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000077.1:18433-22740:- | gene-YAL024C_SA1 | rna-NM_001178169.1_SA1 | cds-NP_009378.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005487.1:102250-106557:- | gene-YAL024C_ThermosaccDry | rna-NM_001178169.1_ThermosaccDry | cds-NP_009378.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005455.1:103536-107843:- | gene-YAL024C_VR1 | rna-NM_001178169.1_VR1 | cds-NP_009378.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000002.1:74061-78368:- | gene-YAL024C_ZTW1 | rna-NM_001178169.1_ZTW1 | cds-NP_009378.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:91626-95954:- | gene-YAL024C_Sparadoxus | rna-NM_001178169.1_Sparadoxus | cds-NP_009378.1_Sparadoxus | 88.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |