Gene name: LST8
Reference locus (S288C): YNL006W
Gene biotype: protein_coding
Description: Target of rapamycin complex subunit LST8; Protein required for the transport of Gap1p; required for the transport of amino acid permease Gap1p from the Golgi to the cell surface; component of the TOR signaling pathway; associates with both Tor1p and Tor2p; contains a WD-repeat
Top 10 interactors (score): TSC11 (0.999); AVO1 (0.999); KOG1 (0.999); TOR1 (0.999); TOR2 (0.999); TCO89 (0.998); BIT61 (0.997); AVO2 (0.997); RHB1 (0.995); SCH9 (0.993); GTR1 (0.991); TAP42 (0.987); GTR2 (0.986); YPK1 (0.984); BIT2 (0.976); SLM1 (0.963); ATG1 (0.948); LST7 (0.939); TTI1 (0.934); PPH21 (0.928)
Homologues (species, bitscore): MLST8 (Homo sapiens, 303.9); Mlst8 (Mus musculus, 306.2); mlst8 (Danio rerio, 305.1); mlst8 (Xenopus tropicalis, 304.3); Lst8 (Drosophila melanogaster, 242.3); C10H11.8 (Caenorhabditis elegans, 128.6); LST8-1 (Arabidopsis thaliana, 335.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:603158-604069:+ | gene-YNL006W_AKU4011 | rna-NM_001182845.3_AKU4011 | cds-NP_014392.3_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000196.1:11525-12436:- | gene-YNL006W_1_BG1 | Unknown | Unknown | 100.0 | 100.0 | Verified | 2 | 2 | 1 | Unknown | Unknown | Unknown | Unknown | Unknown |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:505583-506494:+ | gene-YNL006W_BG1 | rna-NM_001182845.3_BG1 | cds-NP_014392.3_BG1 | 100.0 | 100.0 | Verified | 2 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:619972-620883:+ | gene-YNL006W_Bruggeman | rna-NM_001182845.3_Bruggeman | cds-NP_014392.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:655355-656266:+ | gene-YNL006W_CAT1 | rna-NM_001182845.3_CAT1 | cds-NP_014392.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:608855-609766:+ | gene-YNL006W_CBS1585 | rna-NM_001182845.3_CBS1585 | cds-NP_014392.3_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:670886-671797:+ | gene-YNL006W_CBS436 | rna-NM_001182845.3_CBS436 | cds-NP_014392.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:598663-599574:+ | gene-YNL006W_CBS6412 | rna-NM_001182845.3_CBS6412 | cds-NP_014392.3_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:599826-600737:+ | gene-YNL006W_CBS6413 | rna-NM_001182845.3_CBS6413 | cds-NP_014392.3_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:613717-614628:+ | gene-YNL006W_CENPK1137D | rna-NM_001182845.3_CENPK1137D | cds-NP_014392.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:605225-606136:+ | gene-YNL006W_EthanolRed | rna-NM_001182845.3_EthanolRed | cds-NP_014392.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:595994-596905:+ | gene-YNL006W_FaliES1 | rna-NM_001182845.3_FaliES1 | cds-NP_014392.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000008.1:11079-11990:- | gene-YNL006W_JAY291 | rna-NM_001182845.3_JAY291 | cds-NP_014392.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:618061-618972:+ | gene-YNL006W_MUCL30387 | rna-NM_001182845.3_MUCL30387 | cds-NP_014392.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:658891-659802:+ | gene-YNL006W_MUCL30388 | rna-NM_001182845.3_MUCL30388 | cds-NP_014392.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:600363-601274:+ | gene-YNL006W_MUCL39482 | rna-NM_001182845.3_MUCL39482 | cds-NP_014392.3_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:604155-605066:+ | gene-YNL006W_MUCL42920 | rna-NM_001182845.3_MUCL42920 | cds-NP_014392.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:620036-620947:+ | gene-YNL006W_NCIM3186 | rna-NM_001182845.3_NCIM3186 | cds-NP_014392.3_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:602616-603527:+ | gene-YNL006W_NCYC1407 | rna-NM_001182845.3_NCYC1407 | cds-NP_014392.3_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:604533-605444:+ | gene-YNL006W_PE2H3 | rna-NM_001182845.3_PE2H3 | cds-NP_014392.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:605851-606762:+ | gene-YNL006W_PE2H4 | rna-NM_001182845.3_PE2H4 | cds-NP_014392.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:620067-620978:+ | gene-YNL006W_S288C | rna-NM_001182845.3_S288C | cds-NP_014392.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000068.1:17758-18669:+ | gene-YNL006W_SA1 | rna-NM_001182845.3_SA1 | cds-NP_014392.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:596334-597245:+ | gene-YNL006W_ThermosaccDry | rna-NM_001182845.3_ThermosaccDry | cds-NP_014392.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:638878-639789:+ | gene-YNL006W_VR1 | rna-NM_001182845.3_VR1 | cds-NP_014392.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:505149-506060:+ | gene-YNL006W_ZTW1 | rna-NM_001182845.3_ZTW1 | cds-NP_014392.3_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:611317-612228:+ | gene-YNL006W_Sparadoxus | rna-NM_001182845.3_Sparadoxus | cds-NP_014392.3_Sparadoxus | 93.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |