Gene name: LSB6
Reference locus (S288C): YJL100W
Gene biotype: protein_coding
Description: Type II phosphatidylinositol 4-kinase; binds Las17p, a homolog of human Wiskott-Aldrich Syndrome protein involved in actin patch assembly and actin polymerization; Belongs to the PI3/PI4-kinase family
Top 10 interactors (score): STT4 (0.998); PIK1 (0.998); FAB1 (0.988); VPS34 (0.982); MSS4 (0.979); SAC1 (0.971); LAS17 (0.954); INP53 (0.948); INP52 (0.929); YMR1 (0.928); INP51 (0.928); PIS1 (0.924); PLC1 (0.917); TEP1 (0.903); GUT2 (0.876); FRQ1 (0.802); OSH2 (0.753); SCP1 (0.728); ERG2 (0.722); VPS74 (0.689)
Homologues (species, bitscore): PI4K2B (Homo sapiens, 220.3); Pi4k2b (Mus musculus, 224.9); pi4k2b (Danio rerio, 224.9); pi4k2a (Xenopus tropicalis, 221.5); CG2929 (Drosophila melanogaster, 217.2); ZC8.6 (Caenorhabditis elegans, 208.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:220004-221827:+ | gene-YJL100W_AKU4011 | rna-NM_001181533.1_AKU4011 | cds-NP_012435.1_AKU4011 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:392627-394450:- | gene-YJL100W_BG1 | rna-NM_001181533.1_BG1 | cds-NP_012435.1_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:231429-233252:+ | gene-YJL100W_Bruggeman | rna-NM_001181533.1_Bruggeman | cds-NP_012435.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:236344-238167:+ | gene-YJL100W_CAT1 | rna-NM_001181533.1_CAT1 | cds-NP_012435.1_CAT1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:231665-233488:+ | gene-YJL100W_CBS1585 | rna-NM_001181533.1_CBS1585 | cds-NP_012435.1_CBS1585 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:249752-251575:+ | gene-YJL100W_CBS436 | rna-NM_001181533.1_CBS436 | cds-NP_012435.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:220762-222585:+ | gene-YJL100W_CBS6412 | rna-NM_001181533.1_CBS6412 | cds-NP_012435.1_CBS6412 | 98.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:222117-223940:+ | gene-YJL100W_CBS6413 | rna-NM_001181533.1_CBS6413 | cds-NP_012435.1_CBS6413 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:219717-221540:+ | gene-YJL100W_CENPK1137D | rna-NM_001181533.1_CENPK1137D | cds-NP_012435.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:223851-225674:+ | gene-YJL100W_EthanolRed | rna-NM_001181533.1_EthanolRed | cds-NP_012435.1_EthanolRed | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:235428-237251:+ | gene-YJL100W_FaliES1 | rna-NM_001181533.1_FaliES1 | cds-NP_012435.1_FaliES1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000138.1:33045-34868:+ | gene-YJL100W_JAY291 | rna-NM_001181533.1_JAY291 | cds-NP_012435.1_JAY291 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:233696-235519:+ | gene-YJL100W_MUCL30387 | rna-NM_001181533.1_MUCL30387 | cds-NP_012435.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:229774-231597:+ | gene-YJL100W_MUCL30388 | rna-NM_001181533.1_MUCL30388 | cds-NP_012435.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:224422-226245:+ | gene-YJL100W_MUCL39482 | rna-NM_001181533.1_MUCL39482 | cds-NP_012435.1_MUCL39482 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:230603-232426:+ | gene-YJL100W_MUCL42920 | rna-NM_001181533.1_MUCL42920 | cds-NP_012435.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:237242-239065:+ | gene-YJL100W_NCIM3186 | rna-NM_001181533.1_NCIM3186 | cds-NP_012435.1_NCIM3186 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:223111-224934:+ | gene-YJL100W_NCYC1407 | rna-NM_001181533.1_NCYC1407 | cds-NP_012435.1_NCYC1407 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:235470-237293:+ | gene-YJL100W_PE2H3 | rna-NM_001181533.1_PE2H3 | cds-NP_012435.1_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:235114-236937:+ | gene-YJL100W_PE2H4 | rna-NM_001181533.1_PE2H4 | cds-NP_012435.1_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:237263-239086:+ | gene-YJL100W_S288C | rna-NM_001181533.1_S288C | cds-NP_012435.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:32988-34811:+ | gene-YJL100W_SA1 | rna-NM_001181533.1_SA1 | cds-NP_012435.1_SA1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:228837-230660:+ | gene-YJL100W_ThermosaccDry | rna-NM_001181533.1_ThermosaccDry | cds-NP_012435.1_ThermosaccDry | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:229249-231072:+ | gene-YJL100W_VR1 | rna-NM_001181533.1_VR1 | cds-NP_012435.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:210198-212021:+ | gene-YJL100W_ZTW1 | rna-NM_001181533.1_ZTW1 | cds-NP_012435.1_ZTW1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:234258-236081:+ | gene-YJL100W_Sparadoxus | rna-NM_001181533.1_Sparadoxus | cds-NP_012435.1_Sparadoxus | 89.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |