Gene name: LOT6
Reference locus (S288C): YLR011W
Gene biotype: protein_coding
Description: FMN-dependent NAD(P)H:quinone reductase; role in apoptosis-like cell death; may be involved in quinone detoxification; expression elevated at low temperature; sequesters the Cin5p transcription factor in the cytoplasm in complex with the proteasome under reducing conditions
Top 10 interactors (score): LOT5 (0.867); RFS1 (0.816); PST2 (0.795); YCP4 (0.777); OYE2 (0.742); OYE3 (0.714); CIN5 (0.656); ARR3 (0.628); DUS4 (0.622); LTP1 (0.611); RIB7 (0.587); SMM1 (0.577); FRD1 (0.572); DUS3 (0.569); YGL039W (0.568); RPL2A (0.563); RPL2B (0.56); MET5 (0.534); MET32 (0.534); SDH7 (0.52)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:157060-157635:+ | gene-YLR011W_AKU4011 | rna-NM_001181898.1_AKU4011 | cds-NP_013111.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:120288-120863:+ | gene-YLR011W_BG1 | rna-NM_001181898.1_BG1 | cds-NP_013111.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:167455-168030:+ | gene-YLR011W_Bruggeman | rna-NM_001181898.1_Bruggeman | cds-NP_013111.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:167773-168348:+ | gene-YLR011W_CAT1 | rna-NM_001181898.1_CAT1 | cds-NP_013111.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:164658-165233:+ | gene-YLR011W_CBS1585 | rna-NM_001181898.1_CBS1585 | cds-NP_013111.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:155306-155881:+ | gene-YLR011W_CBS436 | rna-NM_001181898.1_CBS436 | cds-NP_013111.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:163429-164004:+ | gene-YLR011W_CBS6412 | rna-NM_001181898.1_CBS6412 | cds-NP_013111.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:164925-165500:+ | gene-YLR011W_CBS6413 | rna-NM_001181898.1_CBS6413 | cds-NP_013111.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:154365-154940:+ | gene-YLR011W_CENPK1137D | rna-NM_001181898.1_CENPK1137D | cds-NP_013111.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:157079-157654:+ | gene-YLR011W_EthanolRed | rna-NM_001181898.1_EthanolRed | cds-NP_013111.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:156650-157225:+ | gene-YLR011W_FaliES1 | rna-NM_001181898.1_FaliES1 | cds-NP_013111.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000431.1:827-1402:+ | gene-YLR011W_JAY291 | rna-NM_001181898.1_JAY291 | cds-NP_013111.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:164811-165386:+ | gene-YLR011W_MUCL30387 | rna-NM_001181898.1_MUCL30387 | cds-NP_013111.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:170757-171332:+ | gene-YLR011W_MUCL30388 | rna-NM_001181898.1_MUCL30388 | cds-NP_013111.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:165130-165705:+ | gene-YLR011W_MUCL39482 | rna-NM_001181898.1_MUCL39482 | cds-NP_013111.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:165080-165655:+ | gene-YLR011W_MUCL42920 | rna-NM_001181898.1_MUCL42920 | cds-NP_013111.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:169077-169652:+ | gene-YLR011W_NCIM3186 | rna-NM_001181898.1_NCIM3186 | cds-NP_013111.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:156733-157308:+ | gene-YLR011W_NCYC1407 | rna-NM_001181898.1_NCYC1407 | cds-NP_013111.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:163098-163673:+ | gene-YLR011W_PE2H3 | rna-NM_001181898.1_PE2H3 | cds-NP_013111.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:162839-163414:+ | gene-YLR011W_PE2H4 | rna-NM_001181898.1_PE2H4 | cds-NP_013111.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:169103-169678:+ | gene-YLR011W_S288C | rna-NM_001181898.1_S288C | cds-NP_013111.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000046.1:961-1536:+ | gene-YLR011W_SA1 | rna-NM_001181898.1_SA1 | cds-NP_013111.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:157153-157728:+ | gene-YLR011W_ThermosaccDry | rna-NM_001181898.1_ThermosaccDry | cds-NP_013111.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:170551-171126:+ | gene-YLR011W_VR1 | rna-NM_001181898.1_VR1 | cds-NP_013111.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:156510-157085:+ | gene-YLR011W_ZTW1 | rna-NM_001181898.1_ZTW1 | cds-NP_013111.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:165341-165919:+ | gene-YLR011W_Sparadoxus | rna-NM_001181898.1_Sparadoxus | cds-NP_013111.1_Sparadoxus | 86.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |