Gene name: LOT5
Reference locus (S288C): YKL183W
Gene biotype: protein_coding
Description: Protein of unknown function; gene expression increases in cultures shifted to a lower temperature; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): SMD1 (0.912); LOT6 (0.867); RPL2A (0.813); RPL2B (0.813); NOP1 (0.694); DSC2 (0.651); PRP43 (0.525); PHO8 (0.454); NOP53 (0.45); FAR8 (0.45); SUT1 (0.447); HMT1 (0.4)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:85576-86496:+ | gene-YKL183W_AKU4011 | rna-NM_001179749.1_AKU4011 | cds-NP_012738.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:62103-63023:+ | gene-YKL183W_BG1 | rna-NM_001179749.1_BG1 | cds-NP_012738.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:102964-103884:+ | gene-YKL183W_Bruggeman | rna-NM_001179749.1_Bruggeman | cds-NP_012738.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:97921-98841:+ | gene-YKL183W_CAT1 | rna-NM_001179749.1_CAT1 | cds-NP_012738.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:97558-98478:+ | gene-YKL183W_CBS1585 | rna-NM_001179749.1_CBS1585 | cds-NP_012738.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:96317-97237:+ | gene-YKL183W_CBS436 | rna-NM_001179749.1_CBS436 | cds-NP_012738.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:83148-84068:+ | gene-YKL183W_CBS6412 | rna-NM_001179749.1_CBS6412 | cds-NP_012738.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:98276-99196:+ | gene-YKL183W_CBS6413 | rna-NM_001179749.1_CBS6413 | cds-NP_012738.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:98547-99467:+ | gene-YKL183W_CENPK1137D | rna-NM_001179749.1_CENPK1137D | cds-NP_012738.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:96462-97382:+ | gene-YKL183W_EthanolRed | rna-NM_001179749.1_EthanolRed | cds-NP_012738.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:97163-98083:+ | gene-YKL183W_FaliES1 | rna-NM_001179749.1_FaliES1 | cds-NP_012738.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000006.2:96147-97067:+ | gene-YKL183W_JAY291 | rna-NM_001179749.1_JAY291 | cds-NP_012738.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:105264-106184:+ | gene-YKL183W_MUCL30387 | rna-NM_001179749.1_MUCL30387 | cds-NP_012738.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:99608-100528:+ | gene-YKL183W_MUCL30388 | rna-NM_001179749.1_MUCL30388 | cds-NP_012738.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:97615-98535:+ | gene-YKL183W_MUCL39482 | rna-NM_001179749.1_MUCL39482 | cds-NP_012738.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:101947-102867:+ | gene-YKL183W_MUCL42920 | rna-NM_001179749.1_MUCL42920 | cds-NP_012738.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:98710-99630:+ | gene-YKL183W_NCIM3186 | rna-NM_001179749.1_NCIM3186 | cds-NP_012738.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:97639-98559:+ | gene-YKL183W_NCYC1407 | rna-NM_001179749.1_NCYC1407 | cds-NP_012738.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:104690-105610:+ | gene-YKL183W_PE2H3 | rna-NM_001179749.1_PE2H3 | cds-NP_012738.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:100984-101904:+ | gene-YKL183W_PE2H4 | rna-NM_001179749.1_PE2H4 | cds-NP_012738.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:98721-99641:+ | gene-YKL183W_S288C | rna-NM_001179749.1_S288C | cds-NP_012738.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:14921-15841:+ | gene-YKL183W_SA1 | rna-NM_001179749.1_SA1 | cds-NP_012738.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:97863-98783:+ | gene-YKL183W_ThermosaccDry | rna-NM_001179749.1_ThermosaccDry | cds-NP_012738.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:96395-97315:+ | gene-YKL183W_VR1 | rna-NM_001179749.1_VR1 | cds-NP_012738.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:96266-97186:+ | gene-YKL183W_ZTW1 | rna-NM_001179749.1_ZTW1 | cds-NP_012738.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:110832-111749:+ | gene-YKL183W_Sparadoxus | rna-NM_001179749.1_Sparadoxus | cds-NP_012738.1_Sparadoxus | 92.7 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |