Gene name: LNP1
Reference locus (S288C): YHR192W
Gene biotype: protein_coding
Description: Endoplasmic reticulum junction formation protein lunapark; Lunapark family member involved in ER network formation; regulates the ER asymmetry-induced inheritance block during ER stress; localizes to ER junctions and this localization is regulated by the yeast atlastin ortholog Sey1p; interacts with the reticulon protein Rtn1p; induced in response to the DNA-damaging agent MMS
Top 10 interactors (score): SEY1 (0.949); RTN2 (0.94); RTN1 (0.932); YOP1 (0.926); SFB3 (0.776); TCB2 (0.705); NVJ2 (0.672); UFE1 (0.671); PRP24 (0.576); LAM4 (0.575); SIP3 (0.562); SCS2 (0.562); YTA6 (0.542); SAP1 (0.542); YSP2 (0.527); ATG40 (0.499); SEC22 (0.489); CIA2 (0.465); HMG1 (0.454); KAP123 (0.447)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:473906-474742:+ | gene-YHR192W_AKU4011 | rna-NM_001179323.1_AKU4011 | cds-NP_012062.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:43007-43843:- | gene-YHR192W_BG1 | rna-NM_001179323.1_BG1 | cds-NP_012062.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:481148-481984:+ | gene-YHR192W_Bruggeman | rna-NM_001179323.1_Bruggeman | cds-NP_012062.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:477429-478265:+ | gene-YHR192W_CAT1 | rna-NM_001179323.1_CAT1 | cds-NP_012062.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:473358-474194:+ | gene-YHR192W_CBS1585 | rna-NM_001179323.1_CBS1585 | cds-NP_012062.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:471298-472134:+ | gene-YHR192W_CBS436 | rna-NM_001179323.1_CBS436 | cds-NP_012062.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:473457-474293:+ | gene-YHR192W_CBS6412 | rna-NM_001179323.1_CBS6412 | cds-NP_012062.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:474748-475584:+ | gene-YHR192W_CBS6413 | rna-NM_001179323.1_CBS6413 | cds-NP_012062.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:480014-480850:+ | gene-YHR192W_CENPK1137D | rna-NM_001179323.1_CENPK1137D | cds-NP_012062.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:532445-533281:+ | gene-YHR192W_EthanolRed | rna-NM_001179323.1_EthanolRed | cds-NP_012062.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:474889-475725:+ | gene-YHR192W_FaliES1 | rna-NM_001179323.1_FaliES1 | cds-NP_012062.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000147.1:20049-20885:+ | gene-YHR192W_JAY291 | rna-NM_001179323.1_JAY291 | cds-NP_012062.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:482474-483310:+ | gene-YHR192W_MUCL30387 | rna-NM_001179323.1_MUCL30387 | cds-NP_012062.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:481897-482733:+ | gene-YHR192W_MUCL30388 | rna-NM_001179323.1_MUCL30388 | cds-NP_012062.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:473269-474105:+ | gene-YHR192W_MUCL39482 | rna-NM_001179323.1_MUCL39482 | cds-NP_012062.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:481213-482049:+ | gene-YHR192W_MUCL42920 | rna-NM_001179323.1_MUCL42920 | cds-NP_012062.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:486708-487544:+ | gene-YHR192W_NCIM3186 | rna-NM_001179323.1_NCIM3186 | cds-NP_012062.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:475732-476568:+ | gene-YHR192W_NCYC1407 | rna-NM_001179323.1_NCYC1407 | cds-NP_012062.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:474888-475724:+ | gene-YHR192W_PE2H3 | rna-NM_001179323.1_PE2H3 | cds-NP_012062.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:482315-483151:+ | gene-YHR192W_PE2H4 | rna-NM_001179323.1_PE2H4 | cds-NP_012062.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:486826-487662:+ | gene-YHR192W_S288C | rna-NM_001179323.1_S288C | cds-NP_012062.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000079.1:34975-35811:+ | gene-YHR192W_SA1 | rna-NM_001179323.1_SA1 | cds-NP_012062.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:475972-476808:+ | gene-YHR192W_ThermosaccDry | rna-NM_001179323.1_ThermosaccDry | cds-NP_012062.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:485190-486026:+ | gene-YHR192W_VR1 | rna-NM_001179323.1_VR1 | cds-NP_012062.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:466207-467043:+ | gene-YHR192W_ZTW1 | rna-NM_001179323.1_ZTW1 | cds-NP_012062.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:472913-473749:+ | gene-YHR192W_Sparadoxus | rna-NM_001179323.1_Sparadoxus | cds-NP_012062.1_Sparadoxus | 90.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |