Gene name: LGE1
Reference locus (S288C): YPL055C
Gene biotype: protein_coding
Description: Transcriptional regulatory protein LGE1; Protein of unknown function; null mutant forms abnormally large cells, and homozygous diploid null mutant displays delayed premeiotic DNA synthesis and reduced efficiency of meiotic nuclear division
Top 10 interactors (score): BRE1 (0.998); RAD6 (0.903); SET2 (0.885); HTZ1 (0.873); UBP8 (0.808); SWR1 (0.793); ARP6 (0.774); VPS71 (0.771); SDC1 (0.771); SWD3 (0.771); SNT1 (0.755); VPS72 (0.75); HTB2 (0.749); HTB1 (0.748); RPN10 (0.744); SSD1 (0.732); UBP10 (0.715); DOT1 (0.681); PDR3 (0.681); SIF2 (0.68)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:425493-426491:- | gene-YPL055C_AKU4011 | rna-NM_001183869.1_AKU4011 | cds-NP_015270.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:470942-471940:+ | gene-YPL055C_BG1 | rna-NM_001183869.1_BG1 | cds-NP_015270.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:502446-503444:- | gene-YPL055C_Bruggeman | rna-NM_001183869.1_Bruggeman | cds-NP_015270.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:542164-543162:- | gene-YPL055C_CAT1 | rna-NM_001183869.1_CAT1 | cds-NP_015270.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:429562-430560:- | gene-YPL055C_CBS1585 | rna-NM_001183869.1_CBS1585 | cds-NP_015270.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:443686-444684:- | gene-YPL055C_CBS436 | rna-NM_001183869.1_CBS436 | cds-NP_015270.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:433755-434753:- | gene-YPL055C_CBS6412 | rna-NM_001183869.1_CBS6412 | cds-NP_015270.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:426114-427112:- | gene-YPL055C_CBS6413 | rna-NM_001183869.1_CBS6413 | cds-NP_015270.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:453966-454964:- | gene-YPL055C_CENPK1137D | rna-NM_001183869.1_CENPK1137D | cds-NP_015270.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:423853-424851:- | gene-YPL055C_EthanolRed | rna-NM_001183869.1_EthanolRed | cds-NP_015270.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:431683-432681:- | gene-YPL055C_FaliES1 | rna-NM_001183869.1_FaliES1 | cds-NP_015270.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000283.1:40284-41282:- | gene-YPL055C_JAY291 | rna-NM_001183869.1_JAY291 | cds-NP_015270.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:443378-444376:- | gene-YPL055C_MUCL30387 | rna-NM_001183869.1_MUCL30387 | cds-NP_015270.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:442521-443519:- | gene-YPL055C_MUCL30388 | rna-NM_001183869.1_MUCL30388 | cds-NP_015270.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:422878-423876:- | gene-YPL055C_MUCL39482 | rna-NM_001183869.1_MUCL39482 | cds-NP_015270.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:481479-482477:- | gene-YPL055C_MUCL42920 | rna-NM_001183869.1_MUCL42920 | cds-NP_015270.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:453975-454973:- | gene-YPL055C_NCIM3186 | rna-NM_001183869.1_NCIM3186 | cds-NP_015270.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:430157-431155:- | gene-YPL055C_NCYC1407 | rna-NM_001183869.1_NCYC1407 | cds-NP_015270.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:436776-437774:- | gene-YPL055C_PE2H3 | rna-NM_001183869.1_PE2H3 | cds-NP_015270.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:436400-437398:- | gene-YPL055C_PE2H4 | rna-NM_001183869.1_PE2H4 | cds-NP_015270.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:453992-454990:- | gene-YPL055C_S288C | rna-NM_001183869.1_S288C | cds-NP_015270.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000057.1:69446-70444:- | gene-YPL055C_SA1 | rna-NM_001183869.1_SA1 | cds-NP_015270.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:431482-432480:- | gene-YPL055C_ThermosaccDry | rna-NM_001183869.1_ThermosaccDry | cds-NP_015270.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:446308-447306:- | gene-YPL055C_VR1 | rna-NM_001183869.1_VR1 | cds-NP_015270.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:430788-431786:- | gene-YPL055C_ZTW1 | rna-NM_001183869.1_ZTW1 | cds-NP_015270.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:431441-432433:- | gene-YPL055C_Sparadoxus | rna-NM_001183869.1_Sparadoxus | cds-NP_015270.1_Sparadoxus | 87.6 | 99.3 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |