LEU5 (YHR002W)


Gene profile

Gene name: LEU5
Reference locus (S288C): YHR002W
Gene biotype: protein_coding

Description: Mitochondrial carrier protein; involved in the accumulation of CoA in the mitochondrial matrix; homolog of human Graves disease protein SLC25A16, which complements yeast null mutant; does not encode an isozyme of Leu4p, as first hypothesized

Top 10 interactors (score): LEU4 (0.918); FLX1 (0.793); ANT1 (0.768); ARG2 (0.751); LEU9 (0.711); NAM2 (0.702); YMR226C (0.671); QCR10 (0.648); DBP8 (0.594); YPR003C (0.591); SLY41 (0.579); YJL193W (0.572); YMD8 (0.56); LEU3 (0.551); EAF6 (0.532); ERD2 (0.532); YKL071W (0.53); PAT1 (0.53); APL5 (0.515); YHI9 (0.513)

Homologues (species, bitscore): SLC25A16 (Homo sapiens, 209.1); Slc25a16 (Mus musculus, 211.1); slc25a16 (Danio rerio, 198.7); slc25a16 (Xenopus tropicalis, 189.5); att-ORFA (Drosophila melanogaster, 174.1); F43G9.3 (Caenorhabditis elegans, 147.5); AT1G14560 (Arabidopsis thaliana, 169.9)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005302.1:97425-98498:+ gene-YHR002W_AKU4011 rna-NM_001179132.1_AKU4011 cds-NP_011865.1_AKU4011 99.9 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000053.1:17141-18214:+ gene-YHR002W_BG1 rna-NM_001179132.1_BG1 cds-NP_011865.1_BG1 99.9 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005510.1:104283-105356:+ gene-YHR002W_Bruggeman rna-NM_001179132.1_Bruggeman cds-NP_011865.1_Bruggeman 99.9 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005526.1:98267-99340:+ gene-YHR002W_CAT1 rna-NM_001179132.1_CAT1 cds-NP_011865.1_CAT1 99.9 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005366.1:98012-99085:+ gene-YHR002W_CBS1585 rna-NM_001179132.1_CBS1585 cds-NP_011865.1_CBS1585 99.9 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005350.1:90510-91583:+ gene-YHR002W_CBS436 rna-NM_001179132.1_CBS436 cds-NP_011865.1_CBS436 99.9 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005334.1:97611-98684:+ gene-YHR002W_CBS6412 rna-NM_001179132.1_CBS6412 cds-NP_011865.1_CBS6412 99.9 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005318.1:97337-98410:+ gene-YHR002W_CBS6413 rna-NM_001179132.1_CBS6413 cds-NP_011865.1_CBS6413 99.9 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001529.1:101970-103043:+ gene-YHR002W_CENPK1137D rna-NM_001179132.1_CENPK1137D cds-NP_011865.1_CENPK1137D 99.9 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005478.1:97421-98494:+ gene-YHR002W_EthanolRed rna-NM_001179132.1_EthanolRed cds-NP_011865.1_EthanolRed 99.9 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005542.1:97950-99023:+ gene-YHR002W_FaliES1 rna-NM_001179132.1_FaliES1 cds-NP_011865.1_FaliES1 99.9 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000064.1:22937-24010:- gene-YHR002W_JAY291 rna-NM_001179132.1_JAY291 cds-NP_011865.1_JAY291 99.9 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005414.1:101023-102096:+ gene-YHR002W_MUCL30387 rna-NM_001179132.1_MUCL30387 cds-NP_011865.1_MUCL30387 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005446.1:102234-103307:+ gene-YHR002W_MUCL30388 rna-NM_001179132.1_MUCL30388 cds-NP_011865.1_MUCL30388 99.9 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005286.1:97038-98111:+ gene-YHR002W_MUCL39482 rna-NM_001179132.1_MUCL39482 cds-NP_011865.1_MUCL39482 99.9 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005430.1:100943-102016:+ gene-YHR002W_MUCL42920 rna-NM_001179132.1_MUCL42920 cds-NP_011865.1_MUCL42920 99.9 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011817.1:108694-109767:+ gene-YHR002W_NCIM3186 rna-NM_001179132.1_NCIM3186 cds-NP_011865.1_NCIM3186 99.7 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005270.1:96454-97527:+ gene-YHR002W_NCYC1407 rna-NM_001179132.1_NCYC1407 cds-NP_011865.1_NCYC1407 99.9 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994147.1:98660-99733:+ gene-YHR002W_PE2H3 rna-NM_001179132.1_PE2H3 cds-NP_011865.1_PE2H3 99.9 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999879.1:106101-107174:+ gene-YHR002W_PE2H4 rna-NM_001179132.1_PE2H4 cds-NP_011865.1_PE2H4 99.9 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001140.6:108812-109885:+ gene-YHR002W_S288C rna-NM_001179132.1_S288C cds-NP_011865.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000075.1:36657-37730:- gene-YHR002W_SA1 rna-NM_001179132.1_SA1 cds-NP_011865.1_SA1 99.9 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005494.1:99040-100113:+ gene-YHR002W_ThermosaccDry rna-NM_001179132.1_ThermosaccDry cds-NP_011865.1_ThermosaccDry 99.9 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005462.1:104587-105660:+ gene-YHR002W_VR1 rna-NM_001179132.1_VR1 cds-NP_011865.1_VR1 99.9 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000017.1:90205-91278:+ gene-YHR002W_ZTW1 rna-NM_001179132.1_ZTW1 cds-NP_011865.1_ZTW1 99.9 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047494.1:96815-97888:+ gene-YHR002W_Sparadoxus rna-NM_001179132.1_Sparadoxus cds-NP_011865.1_Sparadoxus 93.8 100.0 Verified 1 1 1 False True False False False

Additional files