LEU3 (YLR451W)


Gene profile

Gene name: LEU3
Reference locus (S288C): YLR451W
Gene biotype: protein_coding

Description: Regulatory protein LEU3; Zinc-knuckle transcription factor, repressor and activator; regulates genes involved in branched chain amino acid biosynthesis and ammonia assimilation; acts as a repressor in leucine-replete conditions and as an activator in the presence of alpha-isopropylmalate, an intermediate in leucine biosynthesis that accumulates during leucine starvation

Top 10 interactors (score): LEU1 (0.901); GCN4 (0.9); LEU4 (0.866); LEU2 (0.857); DAL81 (0.815); YLR278C (0.788); MOT3 (0.787); BAP2 (0.783); ILV5 (0.78); ILV2 (0.78); PUT3 (0.779); ILV3 (0.749); PPR1 (0.741); FSF1 (0.736); WAR1 (0.718); LYS14 (0.717); UGA3 (0.714); CBF1 (0.697); ARG81 (0.695); LEU9 (0.692)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:974384-977044:+ gene-YLR451W_AKU4011 rna-NM_001182339.3_AKU4011 cds-NP_013556.3_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000048.1:206820-209480:+ gene-YLR451W_BG1 rna-NM_001182339.3_BG1 cds-NP_013556.3_BG1 99.8 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:1012677-1015337:+ gene-YLR451W_Bruggeman rna-NM_001182339.3_Bruggeman cds-NP_013556.3_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:1008685-1011345:+ gene-YLR451W_CAT1 rna-NM_001182339.3_CAT1 cds-NP_013556.3_CAT1 99.8 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:1009974-1012634:+ gene-YLR451W_CBS1585 rna-NM_001182339.3_CBS1585 cds-NP_013556.3_CBS1585 99.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005354.1:999299-1001959:+ gene-YLR451W_CBS436 rna-NM_001182339.3_CBS436 cds-NP_013556.3_CBS436 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:1046003-1048663:+ gene-YLR451W_CBS6412 rna-NM_001182339.3_CBS6412 cds-NP_013556.3_CBS6412 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:1010744-1013404:+ gene-YLR451W_CBS6413 rna-NM_001182339.3_CBS6413 cds-NP_013556.3_CBS6413 99.5 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:1020699-1023379:+ gene-YLR451W_CENPK1137D rna-NM_001182339.3_CENPK1137D cds-NP_013556.3_CENPK1137D 98.9 100.0 Unannotated 1 1 0 False False False True False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:967400-970060:+ gene-YLR451W_EthanolRed rna-NM_001182339.3_EthanolRed cds-NP_013556.3_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:1002671-1005331:+ gene-YLR451W_FaliES1 rna-NM_001182339.3_FaliES1 cds-NP_013556.3_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000194.1:13346-16006:- gene-YLR451W_JAY291 rna-NM_001182339.3_JAY291 cds-NP_013556.3_JAY291 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:1011535-1014195:+ gene-YLR451W_MUCL30387 rna-NM_001182339.3_MUCL30387 cds-NP_013556.3_MUCL30387 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:1021368-1024028:+ gene-YLR451W_MUCL30388 rna-NM_001182339.3_MUCL30388 cds-NP_013556.3_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:1011208-1013868:+ gene-YLR451W_MUCL39482 rna-NM_001182339.3_MUCL39482 cds-NP_013556.3_MUCL39482 99.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:1011659-1014319:+ gene-YLR451W_MUCL42920 rna-NM_001182339.3_MUCL42920 cds-NP_013556.3_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:1036067-1038727:+ gene-YLR451W_NCIM3186 rna-NM_001182339.3_NCIM3186 cds-NP_013556.3_NCIM3186 99.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:1020645-1023305:+ gene-YLR451W_NCYC1407 rna-NM_001182339.3_NCYC1407 cds-NP_013556.3_NCYC1407 99.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:1007089-1009749:+ gene-YLR451W_PE2H3 rna-NM_001182339.3_PE2H3 cds-NP_013556.3_PE2H3 99.7 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:1006833-1009493:+ gene-YLR451W_PE2H4 rna-NM_001182339.3_PE2H4 cds-NP_013556.3_PE2H4 99.7 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:1036093-1038753:+ gene-YLR451W_S288C rna-NM_001182339.3_S288C cds-NP_013556.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000007.1:21109-23769:- gene-YLR451W_SA1 rna-NM_001182339.3_SA1 cds-NP_013556.3_SA1 99.8 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:1005749-1008409:+ gene-YLR451W_ThermosaccDry rna-NM_001182339.3_ThermosaccDry cds-NP_013556.3_ThermosaccDry 99.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:1012170-1014830:+ gene-YLR451W_VR1 rna-NM_001182339.3_VR1 cds-NP_013556.3_VR1 99.7 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000025.1:336003-338662:+ gene-YLR451W_ZTW1 rna-NM_001182339.3_ZTW1 cds-NP_013556.3_ZTW1 99.7 99.9 Unannotated 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047498.1:984944-987607:+ gene-YLR451W_Sparadoxus rna-NM_001182339.3_Sparadoxus cds-NP_013556.3_Sparadoxus 91.0 99.8 Verified 1 1 1 False True False False False

Additional files