Gene name: LEE1
Reference locus (S288C): YPL054W
Gene biotype: protein_coding
Description: Zinc finger protein lee1; Zinc-finger protein of unknown function
Top 10 interactors (score): YLR149C (0.756); ESL1 (0.745); YHR219W (0.744); STB2 (0.71); GLO4 (0.697); RDI1 (0.656); MOH1 (0.648); YPR204W (0.631); GGC1 (0.615); PCL8 (0.556); ATP20 (0.539); RIM11 (0.537); SOL4 (0.531); TMT1 (0.528); CLG1 (0.526); AI2 (0.525); MRK1 (0.516); NSE3 (0.501); SEN2 (0.499); NIP7 (0.497)
Homologues (species, bitscore): MKRN1 (Homo sapiens, 53.1); Mkrn2 (Mus musculus, 50.4); mkrn2 (Danio rerio, 55.1); ENSXETP00000043492 (Xenopus tropicalis, 52.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:427253-428158:+ | gene-YPL054W_AKU4011 | rna-NM_001183868.1_AKU4011 | cds-NP_015271.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:469275-470180:- | gene-YPL054W_BG1 | rna-NM_001183868.1_BG1 | cds-NP_015271.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:504206-505111:+ | gene-YPL054W_Bruggeman | rna-NM_001183868.1_Bruggeman | cds-NP_015271.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:543930-544835:+ | gene-YPL054W_CAT1 | rna-NM_001183868.1_CAT1 | cds-NP_015271.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:431322-432227:+ | gene-YPL054W_CBS1585 | rna-NM_001183868.1_CBS1585 | cds-NP_015271.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:445452-446357:+ | gene-YPL054W_CBS436 | rna-NM_001183868.1_CBS436 | cds-NP_015271.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:435515-436420:+ | gene-YPL054W_CBS6412 | rna-NM_001183868.1_CBS6412 | cds-NP_015271.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:427874-428779:+ | gene-YPL054W_CBS6413 | rna-NM_001183868.1_CBS6413 | cds-NP_015271.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:455733-456638:+ | gene-YPL054W_CENPK1137D | rna-NM_001183868.1_CENPK1137D | cds-NP_015271.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:425612-426517:+ | gene-YPL054W_EthanolRed | rna-NM_001183868.1_EthanolRed | cds-NP_015271.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:433442-434347:+ | gene-YPL054W_FaliES1 | rna-NM_001183868.1_FaliES1 | cds-NP_015271.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000283.1:42044-42949:+ | gene-YPL054W_JAY291 | rna-NM_001183868.1_JAY291 | cds-NP_015271.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:445138-446043:+ | gene-YPL054W_MUCL30387 | rna-NM_001183868.1_MUCL30387 | cds-NP_015271.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:444279-445184:+ | gene-YPL054W_MUCL30388 | rna-NM_001183868.1_MUCL30388 | cds-NP_015271.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:424638-425543:+ | gene-YPL054W_MUCL39482 | rna-NM_001183868.1_MUCL39482 | cds-NP_015271.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:483239-484144:+ | gene-YPL054W_MUCL42920 | rna-NM_001183868.1_MUCL42920 | cds-NP_015271.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:455742-456647:+ | gene-YPL054W_NCIM3186 | rna-NM_001183868.1_NCIM3186 | cds-NP_015271.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:431916-432821:+ | gene-YPL054W_NCYC1407 | rna-NM_001183868.1_NCYC1407 | cds-NP_015271.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:438536-439441:+ | gene-YPL054W_PE2H3 | rna-NM_001183868.1_PE2H3 | cds-NP_015271.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:438160-439065:+ | gene-YPL054W_PE2H4 | rna-NM_001183868.1_PE2H4 | cds-NP_015271.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:455759-456664:+ | gene-YPL054W_S288C | rna-NM_001183868.1_S288C | cds-NP_015271.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000057.1:71206-72111:+ | gene-YPL054W_SA1 | rna-NM_001183868.1_SA1 | cds-NP_015271.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:433241-434146:+ | gene-YPL054W_ThermosaccDry | rna-NM_001183868.1_ThermosaccDry | cds-NP_015271.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:448068-448973:+ | gene-YPL054W_VR1 | rna-NM_001183868.1_VR1 | cds-NP_015271.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:432547-433452:+ | gene-YPL054W_ZTW1 | rna-NM_001183868.1_ZTW1 | cds-NP_015271.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:433171-434076:+ | gene-YPL054W_Sparadoxus | rna-NM_001183868.1_Sparadoxus | cds-NP_015271.1_Sparadoxus | 88.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |