Gene name: LDS2
Reference locus (S288C): YOL047C
Gene biotype: protein_coding
Description: Protein Involved in spore wall assembly; localizes to lipid droplets found on or outside of the prospore membrane; shares similarity with Lds1p and Rrt8p, and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern
Top 10 interactors (score): IRC18 (0.941); OSW7 (0.894); LOH1 (0.696); YEL023C (0.692); SHE10 (0.671); NPP1 (0.618); MIP6 (0.615); HUL4 (0.594); PES4 (0.549); RRT12 (0.525); DTR1 (0.499); ROG1 (0.497); RRT8 (0.484); DIT2 (0.482); DIT1 (0.45); SPO20 (0.42)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:225979-227112:- | gene-YOL047C_AKU4011 | rna-NM_001183301.1_AKU4011 | cds-NP_014595.2_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:41598-42731:- | gene-YOL047C_BG1 | rna-NM_001183301.1_BG1 | cds-NP_014595.2_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:228831-229964:- | gene-YOL047C_Bruggeman | rna-NM_001183301.1_Bruggeman | cds-NP_014595.2_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:226688-227821:- | gene-YOL047C_CAT1 | rna-NM_001183301.1_CAT1 | cds-NP_014595.2_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:220649-221782:- | gene-YOL047C_CBS1585 | rna-NM_001183301.1_CBS1585 | cds-NP_014595.2_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:224925-226058:- | gene-YOL047C_CBS436 | rna-NM_001183301.1_CBS436 | cds-NP_014595.2_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:220013-221146:- | gene-YOL047C_CBS6412 | rna-NM_001183301.1_CBS6412 | cds-NP_014595.2_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:227532-228665:- | gene-YOL047C_CBS6413 | rna-NM_001183301.1_CBS6413 | cds-NP_014595.2_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:241315-242448:- | gene-YOL047C_CENPK1137D | rna-NM_001183301.1_CENPK1137D | cds-NP_014595.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:222968-224101:- | gene-YOL047C_EthanolRed | rna-NM_001183301.1_EthanolRed | cds-NP_014595.2_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:225884-227017:- | gene-YOL047C_FaliES1 | rna-NM_001183301.1_FaliES1 | cds-NP_014595.2_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000018.1:39446-40579:+ | gene-YOL047C_JAY291 | rna-NM_001183301.1_JAY291 | cds-NP_014595.2_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:231854-232987:- | gene-YOL047C_MUCL30387 | rna-NM_001183301.1_MUCL30387 | cds-NP_014595.2_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:236201-237334:- | gene-YOL047C_MUCL30388 | rna-NM_001183301.1_MUCL30388 | cds-NP_014595.2_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:228134-229267:- | gene-YOL047C_MUCL39482 | rna-NM_001183301.1_MUCL39482 | cds-NP_014595.2_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:243065-244198:- | gene-YOL047C_MUCL42920 | rna-NM_001183301.1_MUCL42920 | cds-NP_014595.2_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:241503-242636:- | gene-YOL047C_NCIM3186 | rna-NM_001183301.1_NCIM3186 | cds-NP_014595.2_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:234878-236011:- | gene-YOL047C_NCYC1407 | rna-NM_001183301.1_NCYC1407 | cds-NP_014595.2_NCYC1407 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:217292-218425:- | gene-YOL047C_PE2H3 | rna-NM_001183301.1_PE2H3 | cds-NP_014595.2_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:228266-229399:- | gene-YOL047C_PE2H4 | rna-NM_001183301.1_PE2H4 | cds-NP_014595.2_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:241614-242747:- | gene-YOL047C_S288C | rna-NM_001183301.1_S288C | cds-NP_014595.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:209615-210748:- | gene-YOL047C_SA1 | rna-NM_001183301.1_SA1 | cds-NP_014595.2_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:224455-225588:- | gene-YOL047C_ThermosaccDry | rna-NM_001183301.1_ThermosaccDry | cds-NP_014595.2_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:224517-225650:- | gene-YOL047C_VR1 | rna-NM_001183301.1_VR1 | cds-NP_014595.2_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:224324-225457:- | gene-YOL047C_ZTW1 | rna-NM_001183301.1_ZTW1 | cds-NP_014595.2_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:232679-233811:- | gene-YOL047C_Sparadoxus | rna-NM_001183301.1_Sparadoxus | cds-NP_014595.2_Sparadoxus | 89.8 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |