Gene name: LDS1
Reference locus (S288C): YAL018C
Gene biotype: protein_coding
Description: Protein Involved in spore wall assembly; localizes to lipid droplets found on or outside of the prospore membrane; shares similarity with Lds2p and Rrt8p, and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants
Top 10 interactors (score): YBL010C (0.945); ECM13 (0.845); PEX32 (0.813); SEO1 (0.776); PRO2 (0.77); FBP26 (0.765); ZIP1 (0.711); YPT32 (0.67); CDC7 (0.403); CDC5 (0.4)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005295.1:103677-104654:- | gene-YAL018C_AKU4011 | rna-NM_001178163.1_AKU4011 | cds-NP_009384.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000070.1:90625-91602:- | gene-YAL018C_BG1 | rna-NM_001178163.1_BG1 | cds-NP_009384.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005503.1:118548-119525:- | gene-YAL018C_Bruggeman | rna-NM_001178163.1_Bruggeman | cds-NP_009384.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005519.1:104885-105862:- | gene-YAL018C_CAT1 | rna-NM_001178163.1_CAT1 | cds-NP_009384.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005359.1:116696-117673:- | gene-YAL018C_CBS1585 | rna-NM_001178163.1_CBS1585 | cds-NP_009384.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:116965-117942:- | gene-YAL018C_CBS436 | rna-NM_001178163.1_CBS436 | cds-NP_009384.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:729783-730760:- | gene-YAL018C_CBS6412 | rna-NM_001178163.1_CBS6412 | cds-NP_009384.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005311.1:114959-115936:- | gene-YAL018C_CBS6413 | rna-NM_001178163.1_CBS6413 | cds-NP_009384.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001522.1:118722-119699:- | gene-YAL018C_CENPK1137D | rna-NM_001178163.1_CENPK1137D | cds-NP_009384.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005471.1:105098-106075:- | gene-YAL018C_EthanolRed | rna-NM_001178163.1_EthanolRed | cds-NP_009384.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005535.1:119722-120699:- | gene-YAL018C_FaliES1 | rna-NM_001178163.1_FaliES1 | cds-NP_009384.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000084.1:90992-91969:- | gene-YAL018C_JAY291 | rna-NM_001178163.1_JAY291 | cds-NP_009384.1_JAY291 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005407.1:119675-120652:- | gene-YAL018C_MUCL30387 | rna-NM_001178163.1_MUCL30387 | cds-NP_009384.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005439.1:116197-117174:- | gene-YAL018C_MUCL30388 | rna-NM_001178163.1_MUCL30388 | cds-NP_009384.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005279.1:115478-116455:- | gene-YAL018C_MUCL39482 | rna-NM_001178163.1_MUCL39482 | cds-NP_009384.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005423.1:117857-118834:- | gene-YAL018C_MUCL42920 | rna-NM_001178163.1_MUCL42920 | cds-NP_009384.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:118441-119418:- | gene-YAL018C_NCIM3186 | rna-NM_001178163.1_NCIM3186 | cds-NP_009384.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005263.1:103367-104344:- | gene-YAL018C_NCYC1407 | rna-NM_001178163.1_NCYC1407 | cds-NP_009384.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:105280-106257:- | gene-YAL018C_PE2H3 | rna-NM_001178163.1_PE2H3 | cds-NP_009384.1_PE2H3 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:104999-105976:- | gene-YAL018C_PE2H4 | rna-NM_001178163.1_PE2H4 | cds-NP_009384.1_PE2H4 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:118564-119541:- | gene-YAL018C_S288C | rna-NM_001178163.1_S288C | cds-NP_009384.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000077.1:35433-36410:- | gene-YAL018C_SA1 | rna-NM_001178163.1_SA1 | cds-NP_009384.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005487.1:119235-120212:- | gene-YAL018C_ThermosaccDry | rna-NM_001178163.1_ThermosaccDry | cds-NP_009384.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005455.1:120524-121501:- | gene-YAL018C_VR1 | rna-NM_001178163.1_VR1 | cds-NP_009384.1_VR1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000002.1:91047-92024:- | gene-YAL018C_ZTW1 | rna-NM_001178163.1_ZTW1 | cds-NP_009384.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:108590-109567:- | gene-YAL018C_Sparadoxus | rna-NM_001178163.1_Sparadoxus | cds-NP_009384.1_Sparadoxus | 88.7 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |