Gene name: LDO45
Reference locus (S288C): YMR147W
Gene biotype: protein_coding
Description: Uncharacterized protein YMR147W; Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cell periphery
Top 10 interactors (score): YHR202W (0.863); YDR018C (0.813); YFL064C (0.779); YHR127W (0.778); OSW5 (0.77); HOP2 (0.753); PUS2 (0.75); YGL081W (0.747); YBL111C (0.746); YRF1-8 (0.745); YBR138C (0.745); YDL012C (0.745); YSP3 (0.716); MRM2 (0.71); GMC2 (0.707); YPR202W (0.698); PIG1 (0.698); REH1 (0.697); ECM38 (0.696); PHO92 (0.693)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:598692-600305:+ | gene-YMR147W_AKU4011 | rna-NM_001182649.2_AKU4011 | cds-NP_013867.2_AKU4011 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000068.1:72227-73840:- | gene-YMR147W_BG1 | rna-NM_001182649.2_BG1 | cds-NP_013867.2_BG1 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:541875-543488:+ | gene-YMR147W_Bruggeman | rna-NM_001182649.2_Bruggeman | cds-NP_013867.2_Bruggeman | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:544090-545703:+ | gene-YMR147W_CAT1 | rna-NM_001182649.2_CAT1 | cds-NP_013867.2_CAT1 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:531615-533228:+ | gene-YMR147W_CBS1585 | rna-NM_001182649.2_CBS1585 | cds-NP_013867.2_CBS1585 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:535504-537117:+ | gene-YMR147W_CBS436 | rna-NM_001182649.2_CBS436 | cds-NP_013867.2_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:644609-646222:+ | gene-YMR147W_CBS6412 | rna-NM_001182649.2_CBS6412 | cds-NP_013867.2_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:530176-531789:+ | gene-YMR147W_CBS6413 | rna-NM_001182649.2_CBS6413 | cds-NP_013867.2_CBS6413 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:553715-555328:+ | gene-YMR147W_CENPK1137D | rna-NM_001182649.2_CENPK1137D | cds-NP_013867.2_CENPK1137D | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:529809-531422:+ | gene-YMR147W_EthanolRed | rna-NM_001182649.2_EthanolRed | cds-NP_013867.2_EthanolRed | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:536808-538421:+ | gene-YMR147W_FaliES1 | rna-NM_001182649.2_FaliES1 | cds-NP_013867.2_FaliES1 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000115.1:8637-10251:+ | gene-YMR147W_JAY291 | rna-NM_001182649.2_JAY291 | cds-NP_013867.2_JAY291 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:536600-538213:+ | gene-YMR147W_MUCL30387 | rna-NM_001182649.2_MUCL30387 | cds-NP_013867.2_MUCL30387 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:542132-543745:+ | gene-YMR147W_MUCL30388 | rna-NM_001182649.2_MUCL30388 | cds-NP_013867.2_MUCL30388 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:532316-533929:+ | gene-YMR147W_MUCL39482 | rna-NM_001182649.2_MUCL39482 | cds-NP_013867.2_MUCL39482 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:538611-540224:+ | gene-YMR147W_MUCL42920 | rna-NM_001182649.2_MUCL42920 | cds-NP_013867.2_MUCL42920 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:559153-560766:+ | gene-YMR147W_NCIM3186 | rna-NM_001182649.2_NCIM3186 | cds-NP_013867.2_NCIM3186 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:531955-533568:+ | gene-YMR147W_NCYC1407 | rna-NM_001182649.2_NCYC1407 | cds-NP_013867.2_NCYC1407 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:542391-544005:+ | gene-YMR147W_PE2H3 | rna-NM_001182649.2_PE2H3 | cds-NP_013867.2_PE2H3 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:542849-544463:+ | gene-YMR147W_PE2H4 | rna-NM_001182649.2_PE2H4 | cds-NP_013867.2_PE2H4 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:559199-560812:+ | gene-YMR147W_S288C | rna-NM_001182649.2_S288C | cds-NP_013867.2_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000048.1:10464-12077:- | gene-YMR147W_SA1 | rna-NM_001182649.2_SA1 | cds-NP_013867.2_SA1 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:532456-534069:+ | gene-YMR147W_ThermosaccDry | rna-NM_001182649.2_ThermosaccDry | cds-NP_013867.2_ThermosaccDry | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:544905-546518:+ | gene-YMR147W_VR1 | rna-NM_001182649.2_VR1 | cds-NP_013867.2_VR1 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:507348-508961:+ | gene-YMR147W_ZTW1 | rna-NM_001182649.2_ZTW1 | cds-NP_013867.2_ZTW1 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:543729-545381:+ | gene-YMR147W_Sparadoxus | rna-NM_001182649.2_Sparadoxus | cds-NP_013867.2_Sparadoxus | 87.1 | 99.9 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |