Gene name: LDO16
Reference locus (S288C): YMR148W
Gene biotype: protein_coding
Description: Outer spore wall protein 5; Protein of unknown function with possible role in spore wall assembly; predicted to contain an N-terminal transmembrane domain; osw5 null mutant spores exhibit increased spore wall permeability and sensitivity to beta-glucanase digestion
Top 10 interactors (score): LOH1 (0.82); OSW1 (0.813); SDH8 (0.81); YMR147W (0.77); IRC18 (0.766); OSW2 (0.765); PET10 (0.765); YDL199C (0.763); RRT12 (0.75); YCR087C-A (0.748); PDP3 (0.717); HFD1 (0.713); RRT8 (0.711); OSW7 (0.699); YEH1 (0.698); SHE10 (0.698); NPP1 (0.68); TSR3 (0.677); DIT2 (0.653); LDB16 (0.653)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:599859-600305:+ | gene-YMR148W_AKU4011 | rna-NM_001182650.1_AKU4011 | cds-NP_013868.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000068.1:72227-72673:- | gene-YMR148W_BG1 | rna-NM_001182650.1_BG1 | cds-NP_013868.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:543042-543488:+ | gene-YMR148W_Bruggeman | rna-NM_001182650.1_Bruggeman | cds-NP_013868.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:545257-545703:+ | gene-YMR148W_CAT1 | rna-NM_001182650.1_CAT1 | cds-NP_013868.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:532782-533228:+ | gene-YMR148W_CBS1585 | rna-NM_001182650.1_CBS1585 | cds-NP_013868.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:536671-537117:+ | gene-YMR148W_CBS436 | rna-NM_001182650.1_CBS436 | cds-NP_013868.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:645776-646222:+ | gene-YMR148W_CBS6412 | rna-NM_001182650.1_CBS6412 | cds-NP_013868.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:531343-531789:+ | gene-YMR148W_CBS6413 | rna-NM_001182650.1_CBS6413 | cds-NP_013868.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:554882-555328:+ | gene-YMR148W_CENPK1137D | rna-NM_001182650.1_CENPK1137D | cds-NP_013868.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:530976-531422:+ | gene-YMR148W_EthanolRed | rna-NM_001182650.1_EthanolRed | cds-NP_013868.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:537975-538421:+ | gene-YMR148W_FaliES1 | rna-NM_001182650.1_FaliES1 | cds-NP_013868.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000115.1:9805-10251:+ | gene-YMR148W_JAY291 | rna-NM_001182650.1_JAY291 | cds-NP_013868.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:537767-538213:+ | gene-YMR148W_MUCL30387 | rna-NM_001182650.1_MUCL30387 | cds-NP_013868.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:543299-543745:+ | gene-YMR148W_MUCL30388 | rna-NM_001182650.1_MUCL30388 | cds-NP_013868.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:533483-533929:+ | gene-YMR148W_MUCL39482 | rna-NM_001182650.1_MUCL39482 | cds-NP_013868.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:539778-540224:+ | gene-YMR148W_MUCL42920 | rna-NM_001182650.1_MUCL42920 | cds-NP_013868.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:560320-560766:+ | gene-YMR148W_NCIM3186 | rna-NM_001182650.1_NCIM3186 | cds-NP_013868.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:533122-533568:+ | gene-YMR148W_NCYC1407 | rna-NM_001182650.1_NCYC1407 | cds-NP_013868.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:543559-544005:+ | gene-YMR148W_PE2H3 | rna-NM_001182650.1_PE2H3 | cds-NP_013868.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:544017-544463:+ | gene-YMR148W_PE2H4 | rna-NM_001182650.1_PE2H4 | cds-NP_013868.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:560366-560812:+ | gene-YMR148W_S288C | rna-NM_001182650.1_S288C | cds-NP_013868.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000048.1:10464-10910:- | gene-YMR148W_SA1 | rna-NM_001182650.1_SA1 | cds-NP_013868.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:533623-534069:+ | gene-YMR148W_ThermosaccDry | rna-NM_001182650.1_ThermosaccDry | cds-NP_013868.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:546072-546518:+ | gene-YMR148W_VR1 | rna-NM_001182650.1_VR1 | cds-NP_013868.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:508515-508961:+ | gene-YMR148W_ZTW1 | rna-NM_001182650.1_ZTW1 | cds-NP_013868.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:544917-545381:+ | gene-YMR148W_Sparadoxus | rna-NM_001182650.1_Sparadoxus | cds-NP_013868.1_Sparadoxus | 86.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |