Gene name: LCL1
Reference locus (S288C): YPL056C
Gene biotype: protein_coding
Description: Long chronological lifespan protein 1; Putative protein of unknown function; deletion mutant is fluconazole resistant and has long chronological lifespan
Top 10 interactors (score): YMR099C (0.768); YOR343C (0.727); YLR407W (0.716); YOR292C (0.712); LCL3 (0.7); YLR257W (0.699); YOL014W (0.691); YKR011C (0.671); MUM2 (0.653); LCL2 (0.651); YPR003C (0.651); YDR222W (0.651); DOS2 (0.617); YGR283C (0.598); YNL208W (0.574); SUR1 (0.574); DIA1 (0.571); YHR097C (0.571); YMR102C (0.57); SET3 (0.569)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:424930-425237:- | gene-YPL056C_AKU4011 | rna-NM_001183870.1_AKU4011 | cds-NP_015269.1_AKU4011 | 94.8 | 98.3 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:472197-472501:+ | gene-YPL056C_BG1 | rna-NM_001183870.1_BG1 | cds-NP_015269.1_BG1 | 98.6 | 99.6 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:501885-502189:- | gene-YPL056C_Bruggeman | rna-NM_001183870.1_Bruggeman | cds-NP_015269.1_Bruggeman | 98.6 | 99.6 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:541602-541907:- | gene-YPL056C_CAT1 | rna-NM_001183870.1_CAT1 | cds-NP_015269.1_CAT1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:429000-429306:- | gene-YPL056C_CBS1585 | rna-NM_001183870.1_CBS1585 | cds-NP_015269.1_CBS1585 | 95.1 | 98.3 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:443125-443429:- | gene-YPL056C_CBS436 | rna-NM_001183870.1_CBS436 | cds-NP_015269.1_CBS436 | 98.6 | 99.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:433192-433499:- | gene-YPL056C_CBS6412 | rna-NM_001183870.1_CBS6412 | cds-NP_015269.1_CBS6412 | 94.8 | 98.3 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:425552-425858:- | gene-YPL056C_CBS6413 | rna-NM_001183870.1_CBS6413 | cds-NP_015269.1_CBS6413 | 95.1 | 98.3 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:453404-453709:- | gene-YPL056C_CENPK1137D | rna-NM_001183870.1_CENPK1137D | cds-NP_015269.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:423290-423597:- | gene-YPL056C_EthanolRed | rna-NM_001183870.1_EthanolRed | cds-NP_015269.1_EthanolRed | 95.2 | 98.3 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:431120-431427:- | gene-YPL056C_FaliES1 | rna-NM_001183870.1_FaliES1 | cds-NP_015269.1_FaliES1 | 95.2 | 98.3 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000283.1:39728-40027:- | gene-YPL056C_JAY291 | rna-NM_001183870.1_JAY291 | cds-NP_015269.1_JAY291 | 97.3 | 98.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:442817-443121:- | gene-YPL056C_MUCL30387 | rna-NM_001183870.1_MUCL30387 | cds-NP_015269.1_MUCL30387 | 98.6 | 99.6 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:441959-442264:- | gene-YPL056C_MUCL30388 | rna-NM_001183870.1_MUCL30388 | cds-NP_015269.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:422329-422622:- | gene-YPL056C_MUCL39482 | rna-NM_001183870.1_MUCL39482 | cds-NP_015269.1_MUCL39482 | 92.1 | 95.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:480918-481222:- | gene-YPL056C_MUCL42920 | rna-NM_001183870.1_MUCL42920 | cds-NP_015269.1_MUCL42920 | 98.6 | 99.6 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:453413-453718:- | gene-YPL056C_NCIM3186 | rna-NM_001183870.1_NCIM3186 | cds-NP_015269.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:429612-429901:- | gene-YPL056C_NCYC1407 | rna-NM_001183870.1_NCYC1407 | cds-NP_015269.1_NCYC1407 | 91.2 | 94.4 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:436220-436519:- | gene-YPL056C_PE2H3 | rna-NM_001183870.1_PE2H3 | cds-NP_015269.1_PE2H3 | 97.3 | 98.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:435838-436143:- | gene-YPL056C_PE2H4 | rna-NM_001183870.1_PE2H4 | cds-NP_015269.1_PE2H4 | 95.8 | 98.3 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:453430-453735:- | gene-YPL056C_S288C | rna-NM_001183870.1_S288C | cds-NP_015269.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000057.1:68885-69189:- | gene-YPL056C_SA1 | rna-NM_001183870.1_SA1 | cds-NP_015269.1_SA1 | 98.6 | 99.6 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:430920-431226:- | gene-YPL056C_ThermosaccDry | rna-NM_001183870.1_ThermosaccDry | cds-NP_015269.1_ThermosaccDry | 95.5 | 98.3 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:445752-446051:- | gene-YPL056C_VR1 | rna-NM_001183870.1_VR1 | cds-NP_015269.1_VR1 | 96.7 | 98.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:430228-430532:- | gene-YPL056C_ZTW1 | rna-NM_001183870.1_ZTW1 | cds-NP_015269.1_ZTW1 | 94.2 | 97.3 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:430887-431186:- | gene-YPL056C_Sparadoxus | rna-NM_001183870.1_Sparadoxus | cds-NP_015269.1_Sparadoxus | 87.7 | 97.0 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |