LAP2 (YNL045W)


Gene profile

Gene name: LAP2
Reference locus (S288C): YNL045W
Gene biotype: protein_coding

Description: Leukotriene A-4 hydrolase homolog; Leucyl aminopeptidase yscIV with epoxide hydrolase activity; metalloenzyme containing one zinc atom; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; also known as leukotriene A4 hydrolase

Top 10 interactors (score): DSF1 (0.896); MAN2 (0.893); CHM7 (0.817); URA6 (0.791); SRC1 (0.76); HEH2 (0.749); DUG1 (0.747); COS6 (0.695); CEM1 (0.683); TAF2 (0.676); GEP7 (0.676); YIP1 (0.654); POM33 (0.649); YMR315W (0.609); DUG2 (0.605); GUA1 (0.593); POM152 (0.591); MOD5 (0.588); PGM2 (0.576); CCM1 (0.571)

Homologues (species, bitscore): LTA4H (Homo sapiens, 435.3); Lta4h (Mus musculus, 428.3); lta4h (Danio rerio, 417.2); lta4h (Xenopus tropicalis, 427.2); DmelCG10602 (Drosophila melanogaster, 368.6); ZC416.6 (Caenorhabditis elegans, 384.0); AT5G13520 (Arabidopsis thaliana, 290.4)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005308.1:530763-532778:+ gene-YNL045W_AKU4011 rna-NM_001182884.1_AKU4011 cds-NP_014353.1_AKU4011 99.8 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000155.1:434723-436738:+ gene-YNL045W_BG1 rna-NM_001182884.1_BG1 cds-NP_014353.1_BG1 99.6 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005516.1:547873-549888:+ gene-YNL045W_Bruggeman rna-NM_001182884.1_Bruggeman cds-NP_014353.1_Bruggeman 99.7 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005532.1:584435-586450:+ gene-YNL045W_CAT1 rna-NM_001182884.1_CAT1 cds-NP_014353.1_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005372.1:531434-533449:+ gene-YNL045W_CBS1585 rna-NM_001182884.1_CBS1585 cds-NP_014353.1_CBS1585 99.7 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005356.1:599683-601698:+ gene-YNL045W_CBS436 rna-NM_001182884.1_CBS436 cds-NP_014353.1_CBS436 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005340.1:526526-528541:+ gene-YNL045W_CBS6412 rna-NM_001182884.1_CBS6412 cds-NP_014353.1_CBS6412 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005324.1:527844-529859:+ gene-YNL045W_CBS6413 rna-NM_001182884.1_CBS6413 cds-NP_014353.1_CBS6413 99.8 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001535.1:536550-538565:+ gene-YNL045W_CENPK1137D rna-NM_001182884.1_CENPK1137D cds-NP_014353.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005484.1:533586-535601:+ gene-YNL045W_EthanolRed rna-NM_001182884.1_EthanolRed cds-NP_014353.1_EthanolRed 99.8 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005548.1:524111-526126:+ gene-YNL045W_FaliES1 rna-NM_001182884.1_FaliES1 cds-NP_014353.1_FaliES1 99.8 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000040.1:39153-41168:+ gene-YNL045W_JAY291 rna-NM_001182884.1_JAY291 cds-NP_014353.1_JAY291 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005420.1:544207-546222:+ gene-YNL045W_MUCL30387 rna-NM_001182884.1_MUCL30387 cds-NP_014353.1_MUCL30387 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005452.1:573627-575642:+ gene-YNL045W_MUCL30388 rna-NM_001182884.1_MUCL30388 cds-NP_014353.1_MUCL30388 99.7 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005292.1:528850-530865:+ gene-YNL045W_MUCL39482 rna-NM_001182884.1_MUCL39482 cds-NP_014353.1_MUCL39482 99.8 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005436.1:532922-534937:+ gene-YNL045W_MUCL42920 rna-NM_001182884.1_MUCL42920 cds-NP_014353.1_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011823.1:542932-544947:+ gene-YNL045W_NCIM3186 rna-NM_001182884.1_NCIM3186 cds-NP_014353.1_NCIM3186 94.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005276.1:530902-532917:+ gene-YNL045W_NCYC1407 rna-NM_001182884.1_NCYC1407 cds-NP_014353.1_NCYC1407 99.7 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994153.1:534070-536085:+ gene-YNL045W_PE2H3 rna-NM_001182884.1_PE2H3 cds-NP_014353.1_PE2H3 99.6 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999885.1:529145-531160:+ gene-YNL045W_PE2H4 rna-NM_001182884.1_PE2H4 cds-NP_014353.1_PE2H4 99.6 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001146.8:542963-544978:+ gene-YNL045W_S288C rna-NM_001182884.1_S288C cds-NP_014353.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000024.1:121995-124010:+ gene-YNL045W_SA1 rna-NM_001182884.1_SA1 cds-NP_014353.1_SA1 99.6 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005500.1:524986-527001:+ gene-YNL045W_ThermosaccDry rna-NM_001182884.1_ThermosaccDry cds-NP_014353.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005468.1:544031-546046:+ gene-YNL045W_VR1 rna-NM_001182884.1_VR1 cds-NP_014353.1_VR1 99.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000030.1:434307-436322:+ gene-YNL045W_ZTW1 rna-NM_001182884.1_ZTW1 cds-NP_014353.1_ZTW1 99.9 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047500.1:540243-542255:+ gene-YNL045W_Sparadoxus rna-NM_001182884.1_Sparadoxus cds-NP_014353.1_Sparadoxus 89.8 99.8 Verified 1 1 1 False True False False False

Additional files