Gene name: LAA1
Reference locus (S288C): YJL207C
Gene biotype: protein_coding
Description: AP-1 accessory protein; colocalizes with clathrin to the late-Golgi apparatus; involved in TGN-endosome transport; physically interacts with AP-1; similar to the mammalian p200; may interact with ribosomes; YJL207C is a non-essential gene
Top 10 interactors (score): APL4 (0.996); APM1 (0.972); APS1 (0.962); RCY1 (0.836); APL2 (0.835); APM2 (0.793); APL3 (0.755); YJL206C (0.75); YIR014W (0.718); SBE2 (0.716); RAV1 (0.715); TRE2 (0.71); CHC1 (0.705); GGA2 (0.696); PRM10 (0.673); TRE1 (0.672); PNS1 (0.66); MEC1 (0.646); MON2 (0.627); CDC39 (0.608)
Homologues (species, bitscore): HEATR5A (Homo sapiens, 81.3); Heatr5a (Mus musculus, 74.3); heatr5a (Danio rerio, 75.5); heatr5a (Xenopus tropicalis, 80.5); CG2747 (Drosophila melanogaster, 80.1); C13F10.4 (Caenorhabditis elegans, 80.5); SWEETIE (Arabidopsis thaliana, 64.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:29791-35835:- | gene-YJL207C_AKU4011 | rna-NM_001181640.1_AKU4011 | cds-NP_012328.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000181.1:7060-13104:- | gene-YJL207C_BG1 | rna-NM_001181640.1_BG1 | cds-NP_012328.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:41592-47636:- | gene-YJL207C_Bruggeman | rna-NM_001181640.1_Bruggeman | cds-NP_012328.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:44339-50383:- | gene-YJL207C_CAT1 | rna-NM_001181640.1_CAT1 | cds-NP_012328.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:35421-41465:- | gene-YJL207C_CBS1585 | rna-NM_001181640.1_CBS1585 | cds-NP_012328.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:60162-66206:- | gene-YJL207C_CBS436 | rna-NM_001181640.1_CBS436 | cds-NP_012328.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:31904-37948:- | gene-YJL207C_CBS6412 | rna-NM_001181640.1_CBS6412 | cds-NP_012328.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:32900-38944:- | gene-YJL207C_CBS6413 | rna-NM_001181640.1_CBS6413 | cds-NP_012328.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:23852-29895:- | gene-YJL207C_CENPK1137D | rna-NM_001181640.1_CENPK1137D | cds-NP_012328.1_CENPK1137D | 99.7 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:34088-40132:- | gene-YJL207C_EthanolRed | rna-NM_001181640.1_EthanolRed | cds-NP_012328.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:39365-45409:- | gene-YJL207C_FaliES1 | rna-NM_001181640.1_FaliES1 | cds-NP_012328.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000301.1:30516-36560:- | gene-YJL207C_JAY291 | rna-NM_001181640.1_JAY291 | cds-NP_012328.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:43325-49369:- | gene-YJL207C_MUCL30387 | rna-NM_001181640.1_MUCL30387 | cds-NP_012328.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:39480-45524:- | gene-YJL207C_MUCL30388 | rna-NM_001181640.1_MUCL30388 | cds-NP_012328.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:34163-40207:- | gene-YJL207C_MUCL39482 | rna-NM_001181640.1_MUCL39482 | cds-NP_012328.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:38766-44810:- | gene-YJL207C_MUCL42920 | rna-NM_001181640.1_MUCL42920 | cds-NP_012328.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:41368-47412:- | gene-YJL207C_NCIM3186 | rna-NM_001181640.1_NCIM3186 | cds-NP_012328.1_NCIM3186 | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:32777-38821:- | gene-YJL207C_NCYC1407 | rna-NM_001181640.1_NCYC1407 | cds-NP_012328.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:45462-51506:- | gene-YJL207C_PE2H3 | rna-NM_001181640.1_PE2H3 | cds-NP_012328.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:39350-45394:- | gene-YJL207C_PE2H4 | rna-NM_001181640.1_PE2H4 | cds-NP_012328.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:41389-47433:- | gene-YJL207C_S288C | rna-NM_001181640.1_S288C | cds-NP_012328.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000022.1:106458-112502:+ | gene-YJL207C_SA1 | rna-NM_001181640.1_SA1 | cds-NP_012328.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:32560-38604:- | gene-YJL207C_ThermosaccDry | rna-NM_001181640.1_ThermosaccDry | cds-NP_012328.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:39418-45462:- | gene-YJL207C_VR1 | rna-NM_001181640.1_VR1 | cds-NP_012328.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:20143-26184:- | gene-YJL207C_ZTW1 | rna-NM_001181640.1_ZTW1 | cds-NP_012328.1_ZTW1 | 99.5 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:44299-50343:- | gene-YJL207C_Sparadoxus | rna-NM_001181640.1_Sparadoxus | cds-NP_012328.1_Sparadoxus | 89.2 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |