Gene name: KXD1
Reference locus (S288C): YGL079W
Gene biotype: protein_coding
Description: Subunit of the BLOC-1 complex involved in endosomal maturation; null mutant is sensitive to drug inducing secretion of vacuolar cargo; GFP-fusion protein localizes to the endosome; Belongs to the KXD1 family
Top 10 interactors (score): CNL1 (0.998); VAB2 (0.997); BLI1 (0.996); SNN1 (0.992); BLS1 (0.99); TMS1 (0.751); PBI1 (0.746); SNA2 (0.712); YPT7 (0.709); VPS21 (0.701); MSB3 (0.691); TVP38 (0.69); EPO1 (0.619); LDB18 (0.617); CET1 (0.591); YGL199C (0.575); TDA5 (0.575); AIM44 (0.574); EOS1 (0.57); GVP36 (0.568)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:362451-363107:+ | gene-YGL079W_AKU4011 | rna-NM_001180944.1_AKU4011 | cds-NP_011436.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:42298-42954:- | gene-YGL079W_BG1 | rna-NM_001180944.1_BG1 | cds-NP_011436.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:364933-365589:+ | gene-YGL079W_Bruggeman | rna-NM_001180944.1_Bruggeman | cds-NP_011436.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:361848-362504:+ | gene-YGL079W_CAT1 | rna-NM_001180944.1_CAT1 | cds-NP_011436.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:365776-366432:+ | gene-YGL079W_CBS1585 | rna-NM_001180944.1_CBS1585 | cds-NP_011436.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:360060-360716:+ | gene-YGL079W_CBS436 | rna-NM_001180944.1_CBS436 | cds-NP_011436.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:350156-350812:+ | gene-YGL079W_CBS6412 | rna-NM_001180944.1_CBS6412 | cds-NP_011436.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:360080-360736:+ | gene-YGL079W_CBS6413 | rna-NM_001180944.1_CBS6413 | cds-NP_011436.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:359633-360289:+ | gene-YGL079W_CENPK1137D | rna-NM_001180944.1_CENPK1137D | cds-NP_011436.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:351524-352180:+ | gene-YGL079W_EthanolRed | rna-NM_001180944.1_EthanolRed | cds-NP_011436.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:354085-354741:+ | gene-YGL079W_FaliES1 | rna-NM_001180944.1_FaliES1 | cds-NP_011436.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000369.1:39717-40374:+ | gene-YGL079W_JAY291 | rna-NM_001180944.1_JAY291 | cds-NP_011436.1_JAY291 | 99.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:361910-362566:+ | gene-YGL079W_MUCL30387 | rna-NM_001180944.1_MUCL30387 | cds-NP_011436.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:364895-365551:+ | gene-YGL079W_MUCL30388 | rna-NM_001180944.1_MUCL30388 | cds-NP_011436.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:362304-362960:+ | gene-YGL079W_MUCL39482 | rna-NM_001180944.1_MUCL39482 | cds-NP_011436.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:367193-367849:+ | gene-YGL079W_MUCL42920 | rna-NM_001180944.1_MUCL42920 | cds-NP_011436.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:359444-360100:+ | gene-YGL079W_NCIM3186 | rna-NM_001180944.1_NCIM3186 | cds-NP_011436.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:353839-354495:+ | gene-YGL079W_NCYC1407 | rna-NM_001180944.1_NCYC1407 | cds-NP_011436.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:355485-356141:+ | gene-YGL079W_PE2H3 | rna-NM_001180944.1_PE2H3 | cds-NP_011436.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:360468-361124:+ | gene-YGL079W_PE2H4 | rna-NM_001180944.1_PE2H4 | cds-NP_011436.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:359444-360100:+ | gene-YGL079W_S288C | rna-NM_001180944.1_S288C | cds-NP_011436.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000089.1:36845-37501:+ | gene-YGL079W_SA1 | rna-NM_001180944.1_SA1 | cds-NP_011436.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:354338-354994:+ | gene-YGL079W_ThermosaccDry | rna-NM_001180944.1_ThermosaccDry | cds-NP_011436.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:464212-464868:+ | gene-YGL079W_VR1 | rna-NM_001180944.1_VR1 | cds-NP_011436.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:351701-352357:+ | gene-YGL079W_ZTW1 | rna-NM_001180944.1_ZTW1 | cds-NP_011436.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:357313-357969:+ | gene-YGL079W_Sparadoxus | rna-NM_001180944.1_Sparadoxus | cds-NP_011436.1_Sparadoxus | 89.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |