KTR4 (YBR199W)


Gene profile

Gene name: KTR4
Reference locus (S288C): YBR199W
Gene biotype: protein_coding

Description: Probable mannosyltransferase KTR4; Glycosyltransferase involved in protein glycosylation; transfers GDP-mannose to methyl-alpha-mannoside in vitro; member of the KRE2/MNT1 mannosyltransferase family of type II membrane proteins with a short cytoplasmic N-terminus, a membrane-spanning region and a highly conserved catalytic lumenal domain

Top 10 interactors (score): ALG2 (0.904); RIC1 (0.849); ERV46 (0.767); YBR197C (0.748); SLM2 (0.746); RMA1 (0.71); CAB5 (0.696); CAB4 (0.693); CAB2 (0.691); YML082W (0.672); ERV41 (0.662); GPI8 (0.653); PRM15 (0.617); YHM2 (0.613); SOL2 (0.611); GUP2 (0.599); CSH1 (0.595); PIB1 (0.593); MET12 (0.573); CAB3 (0.57)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:602280-603674:+ gene-YBR199W_AKU4011 rna-NM_001178547.3_AKU4011 cds-NP_009758.3_AKU4011 99.3 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:592280-593674:+ gene-YBR199W_BG1 rna-NM_001178547.3_BG1 cds-NP_009758.3_BG1 99.2 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:408135-409529:+ gene-YBR199W_Bruggeman rna-NM_001178547.3_Bruggeman cds-NP_009758.3_Bruggeman 99.3 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:607541-608935:+ gene-YBR199W_CAT1 rna-NM_001178547.3_CAT1 cds-NP_009758.3_CAT1 99.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:594061-595455:+ gene-YBR199W_CBS1585 rna-NM_001178547.3_CBS1585 cds-NP_009758.3_CBS1585 99.3 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005344.1:601606-603000:+ gene-YBR199W_CBS436 rna-NM_001178547.3_CBS436 cds-NP_009758.3_CBS436 99.2 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:690670-692064:+ gene-YBR199W_CBS6412 rna-NM_001178547.3_CBS6412 cds-NP_009758.3_CBS6412 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:599867-601261:+ gene-YBR199W_CBS6413 rna-NM_001178547.3_CBS6413 cds-NP_009758.3_CBS6413 99.3 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:612683-614077:+ gene-YBR199W_CENPK1137D rna-NM_001178547.3_CENPK1137D cds-NP_009758.3_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:727436-728830:+ gene-YBR199W_EthanolRed rna-NM_001178547.3_EthanolRed cds-NP_009758.3_EthanolRed 99.5 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:618347-619741:+ gene-YBR199W_FaliES1 rna-NM_001178547.3_FaliES1 cds-NP_009758.3_FaliES1 99.5 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000023.1:11947-13341:+ gene-YBR199W_JAY291 rna-NM_001178547.3_JAY291 cds-NP_009758.3_JAY291 99.2 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:606814-608208:+ gene-YBR199W_MUCL30387 rna-NM_001178547.3_MUCL30387 cds-NP_009758.3_MUCL30387 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:623891-625285:+ gene-YBR199W_MUCL30388 rna-NM_001178547.3_MUCL30388 cds-NP_009758.3_MUCL30388 99.2 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:592434-593828:+ gene-YBR199W_MUCL39482 rna-NM_001178547.3_MUCL39482 cds-NP_009758.3_MUCL39482 99.3 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:601859-603253:+ gene-YBR199W_MUCL42920 rna-NM_001178547.3_MUCL42920 cds-NP_009758.3_MUCL42920 99.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:618706-620100:+ gene-YBR199W_NCIM3186 rna-NM_001178547.3_NCIM3186 cds-NP_009758.3_NCIM3186 99.5 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:594542-595936:+ gene-YBR199W_NCYC1407 rna-NM_001178547.3_NCYC1407 cds-NP_009758.3_NCYC1407 99.3 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:607152-608546:+ gene-YBR199W_PE2H3 rna-NM_001178547.3_PE2H3 cds-NP_009758.3_PE2H3 99.2 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:604828-606222:+ gene-YBR199W_PE2H4 rna-NM_001178547.3_PE2H4 cds-NP_009758.3_PE2H4 99.2 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:618909-620303:+ gene-YBR199W_S288C rna-NM_001178547.3_S288C cds-NP_009758.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000080.1:26602-27996:+ gene-YBR199W_SA1 rna-NM_001178547.3_SA1 cds-NP_009758.3_SA1 99.2 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:617357-618751:+ gene-YBR199W_ThermosaccDry rna-NM_001178547.3_ThermosaccDry cds-NP_009758.3_ThermosaccDry 99.5 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:598528-599922:+ gene-YBR199W_VR1 rna-NM_001178547.3_VR1 cds-NP_009758.3_VR1 99.4 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:591973-593368:+ gene-YBR199W_ZTW1 rna-NM_001178547.3_ZTW1 cds-NP_009758.3_ZTW1 99.6 100.0 Unannotated 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:634609-636003:+ gene-YBR199W_Sparadoxus rna-NM_001178547.3_Sparadoxus cds-NP_009758.3_Sparadoxus 87.9 100.0 Verified 1 1 1 False True False False False

Additional files