Gene name: KTI12
Reference locus (S288C): YKL110C
Gene biotype: protein_coding
Description: Protein that plays a role in modification of tRNA wobble nucleosides; protein plays role in tRNA wobble nucleoside modification with Elongator complex; involved in sensitivity to G1 arrest induced by zymocin; interacts with chromatin throughout the genome; also interacts with Cdc19p; Belongs to the KTI12 family
Top 10 interactors (score): ELP3 (0.998); IKI3 (0.997); ELP2 (0.989); ELP4 (0.976); DST1 (0.972); IKI1 (0.966); NCS6 (0.935); UBA4 (0.933); KTI11 (0.919); URM1 (0.893); SIT4 (0.87); ELP6 (0.86); NCS2 (0.855); HRR25 (0.852); ATS1 (0.831); TRM9 (0.831); SAP190 (0.806); SAP185 (0.786); HHF2 (0.78); HHF1 (0.78)
Homologues (species, bitscore): KTI12 (Homo sapiens, 107.5); Kti12 (Mus musculus, 112.8); kti12 (Danio rerio, 156.8); kti12 (Xenopus tropicalis, 165.6); CG3587 (Drosophila melanogaster, 115.5); Y57G11C.43 (Caenorhabditis elegans, 133.3); KTI12 (Arabidopsis thaliana, 117.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:215507-216448:- | gene-YKL110C_AKU4011 | rna-NM_001179676.1_AKU4011 | cds-NP_012812.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:192631-193572:- | gene-YKL110C_BG1 | rna-NM_001179676.1_BG1 | cds-NP_012812.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:233431-234372:- | gene-YKL110C_Bruggeman | rna-NM_001179676.1_Bruggeman | cds-NP_012812.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:228477-229418:- | gene-YKL110C_CAT1 | rna-NM_001179676.1_CAT1 | cds-NP_012812.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:227738-228679:- | gene-YKL110C_CBS1585 | rna-NM_001179676.1_CBS1585 | cds-NP_012812.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:226327-227268:- | gene-YKL110C_CBS436 | rna-NM_001179676.1_CBS436 | cds-NP_012812.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:212369-213310:- | gene-YKL110C_CBS6412 | rna-NM_001179676.1_CBS6412 | cds-NP_012812.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:228203-229144:- | gene-YKL110C_CBS6413 | rna-NM_001179676.1_CBS6413 | cds-NP_012812.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:228581-229522:- | gene-YKL110C_CENPK1137D | rna-NM_001179676.1_CENPK1137D | cds-NP_012812.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:226184-227125:- | gene-YKL110C_EthanolRed | rna-NM_001179676.1_EthanolRed | cds-NP_012812.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:226997-227938:- | gene-YKL110C_FaliES1 | rna-NM_001179676.1_FaliES1 | cds-NP_012812.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000357.1:49345-50286:- | gene-YKL110C_JAY291 | rna-NM_001179676.1_JAY291 | cds-NP_012812.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:235234-236175:- | gene-YKL110C_MUCL30387 | rna-NM_001179676.1_MUCL30387 | cds-NP_012812.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:229613-230554:- | gene-YKL110C_MUCL30388 | rna-NM_001179676.1_MUCL30388 | cds-NP_012812.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:227534-228475:- | gene-YKL110C_MUCL39482 | rna-NM_001179676.1_MUCL39482 | cds-NP_012812.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:231909-232850:- | gene-YKL110C_MUCL42920 | rna-NM_001179676.1_MUCL42920 | cds-NP_012812.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:228928-229869:- | gene-YKL110C_NCIM3186 | rna-NM_001179676.1_NCIM3186 | cds-NP_012812.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:227724-228665:- | gene-YKL110C_NCYC1407 | rna-NM_001179676.1_NCYC1407 | cds-NP_012812.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:234817-235758:- | gene-YKL110C_PE2H3 | rna-NM_001179676.1_PE2H3 | cds-NP_012812.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:231106-232047:- | gene-YKL110C_PE2H4 | rna-NM_001179676.1_PE2H4 | cds-NP_012812.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:228939-229880:- | gene-YKL110C_S288C | rna-NM_001179676.1_S288C | cds-NP_012812.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:145065-146006:- | gene-YKL110C_SA1 | rna-NM_001179676.1_SA1 | cds-NP_012812.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:227697-228638:- | gene-YKL110C_ThermosaccDry | rna-NM_001179676.1_ThermosaccDry | cds-NP_012812.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:227077-228018:- | gene-YKL110C_VR1 | rna-NM_001179676.1_VR1 | cds-NP_012812.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:226271-227212:- | gene-YKL110C_ZTW1 | rna-NM_001179676.1_ZTW1 | cds-NP_012812.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:243242-244183:- | gene-YKL110C_Sparadoxus | rna-NM_001179676.1_Sparadoxus | cds-NP_012812.1_Sparadoxus | 91.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |