Gene name: KRS1
Reference locus (S288C): YDR037W
Gene biotype: protein_coding
Description: Lysine--tRNA ligase, cytoplasmic; Lysyl-tRNA synthetase
Top 10 interactors (score): GLN4 (0.999); CDC60 (0.999); GUS1 (0.999); ILS1 (0.999); MES1 (0.999); HTS1 (0.998); THS1 (0.994); TYS1 (0.993); YHR020W (0.991); WRS1 (0.989); ARC1 (0.989); DPS1 (0.983); MSY1 (0.974); GRS1 (0.971); FRS1 (0.971); ALA1 (0.969); YDR341C (0.961); VAS1 (0.956); FRS2 (0.955); AIM10 (0.95)
Homologues (species, bitscore): KARS (Homo sapiens, 666.4); Kars (Mus musculus, 668.3); kars (Danio rerio, 661.0); kars (Xenopus tropicalis, 626.3); Aats-lys (Drosophila melanogaster, 692.6); kars-1 (Caenorhabditis elegans, 625.9); ATKRS-1 (Arabidopsis thaliana, 593.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:510890-512665:+ | gene-YDR037W_AKU4011 | rna-NM_001180345.1_AKU4011 | cds-NP_010322.1_AKU4011 | 92.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000120.1:419-2194:- | gene-YDR037W_BG1 | rna-NM_001180345.1_BG1 | cds-NP_010322.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | MBVY01000213.1:1-1103:- | gene-YDR037W_Bruggeman | rna-NM_001180345.1_Bruggeman | cds-NP_010322.1_Bruggeman | 62.0 | 62.1 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | MBWC01000142.1:555-2330:- | gene-YDR037W_CAT1 | rna-NM_001180345.1_CAT1 | cds-NP_010322.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:501847-503622:+ | gene-YDR037W_CBS1585 | rna-NM_001180345.1_CBS1585 | cds-NP_010322.1_CBS1585 | 92.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:518979-520754:+ | gene-YDR037W_CBS436 | rna-NM_001180345.1_CBS436 | cds-NP_010322.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:498258-500033:+ | gene-YDR037W_CBS6412 | rna-NM_001180345.1_CBS6412 | cds-NP_010322.1_CBS6412 | 92.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:526926-528701:+ | gene-YDR037W_CBS6413 | rna-NM_001180345.1_CBS6413 | cds-NP_010322.1_CBS6413 | 92.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:532297-534072:+ | gene-YDR037W_CENPK1137D | rna-NM_001180345.1_CENPK1137D | cds-NP_010322.1_CENPK1137D | 92.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:512780-514555:+ | gene-YDR037W_EthanolRed | rna-NM_001180345.1_EthanolRed | cds-NP_010322.1_EthanolRed | 92.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:519137-520912:+ | gene-YDR037W_FaliES1 | rna-NM_001180345.1_FaliES1 | cds-NP_010322.1_FaliES1 | 92.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000101.1:4812-6586:+ | gene-YDR037W_JAY291 | rna-NM_001180345.1_JAY291 | cds-NP_010322.1_JAY291 | 99.8 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:519215-520990:+ | gene-YDR037W_MUCL30387 | rna-NM_001180345.1_MUCL30387 | cds-NP_010322.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | MBVW01000246.1:2644-3746:+ | gene-YDR037W_MUCL30388 | rna-NM_001180345.1_MUCL30388 | cds-NP_010322.1_MUCL30388 | 61.9 | 62.1 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:503215-504990:+ | gene-YDR037W_MUCL39482 | rna-NM_001180345.1_MUCL39482 | cds-NP_010322.1_MUCL39482 | 92.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000281.1:2650-3752:+ | gene-YDR037W_MUCL42920 | rna-NM_001180345.1_MUCL42920 | cds-NP_010322.1_MUCL42920 | 62.0 | 62.1 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:525363-527138:+ | gene-YDR037W_NCIM3186 | rna-NM_001180345.1_NCIM3186 | cds-NP_010322.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:502151-503926:+ | gene-YDR037W_NCYC1407 | rna-NM_001180345.1_NCYC1407 | cds-NP_010322.1_NCYC1407 | 92.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:517879-519654:+ | gene-YDR037W_PE2H3 | rna-NM_001180345.1_PE2H3 | cds-NP_010322.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:517184-518959:+ | gene-YDR037W_PE2H4 | rna-NM_001180345.1_PE2H4 | cds-NP_010322.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:525440-527215:+ | gene-YDR037W_S288C | rna-NM_001180345.1_S288C | cds-NP_010322.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000065.1:46652-48427:+ | gene-YDR037W_SA1 | rna-NM_001180345.1_SA1 | cds-NP_010322.1_SA1 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:518615-520390:+ | gene-YDR037W_ThermosaccDry | rna-NM_001180345.1_ThermosaccDry | cds-NP_010322.1_ThermosaccDry | 92.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:523814-525589:+ | gene-YDR037W_VR1 | rna-NM_001180345.1_VR1 | cds-NP_010322.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:516510-518285:+ | gene-YDR037W_ZTW1 | rna-NM_001180345.1_ZTW1 | cds-NP_010322.1_ZTW1 | 94.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:520832-522607:+ | gene-YDR037W_Sparadoxus | rna-NM_001180345.1_Sparadoxus | cds-NP_010322.1_Sparadoxus | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |