Gene name: KRE28
Reference locus (S288C): YDR532C
Gene biotype: protein_coding
Description: Cytoplasmic fmr1 interacting protein; Spindle pole body component KRE28; Subunit of a kinetochore-microtubule binding complex; complex bridges centromeric heterochromatin and kinetochore MAPs and motors; required for sister chromatid bi-orientation and kinetochore binding of SAC components; complex also includes Spc105p; modified by sumoylation
Top 10 interactors (score): DSN1 (0.98); SPC105 (0.979); NUF2 (0.81); CDC33 (0.8); MTW1 (0.795); DAD1 (0.761); NSL1 (0.748); OKP1 (0.744); CSE4 (0.712); SPC25 (0.711); SPC24 (0.692); NNF1 (0.651); NDC80 (0.647); CTF19 (0.598); BUB3 (0.594); CHL4 (0.593); IPL1 (0.574); MCM21 (0.571); BUB1 (0.568); AME1 (0.56)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1439409-1440566:- | gene-YDR532C_AKU4011 | rna-NM_001180840.3_AKU4011 | cds-NP_010821.3_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000073.1:81053-82210:- | gene-YDR532C_BG1 | rna-NM_001180840.3_BG1 | cds-NP_010821.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1470701-1471858:- | gene-YDR532C_Bruggeman | rna-NM_001180840.3_Bruggeman | cds-NP_010821.3_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1447892-1449049:- | gene-YDR532C_CAT1 | rna-NM_001180840.3_CAT1 | cds-NP_010821.3_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1434137-1435294:- | gene-YDR532C_CBS1585 | rna-NM_001180840.3_CBS1585 | cds-NP_010821.3_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1453362-1454519:- | gene-YDR532C_CBS436 | rna-NM_001180840.3_CBS436 | cds-NP_010821.3_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1429301-1430458:- | gene-YDR532C_CBS6412 | rna-NM_001180840.3_CBS6412 | cds-NP_010821.3_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1452797-1453954:- | gene-YDR532C_CBS6413 | rna-NM_001180840.3_CBS6413 | cds-NP_010821.3_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1498071-1499228:- | gene-YDR532C_CENPK1137D | rna-NM_001180840.3_CENPK1137D | cds-NP_010821.3_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1442668-1443825:- | gene-YDR532C_EthanolRed | rna-NM_001180840.3_EthanolRed | cds-NP_010821.3_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1446220-1447377:- | gene-YDR532C_FaliES1 | rna-NM_001180840.3_FaliES1 | cds-NP_010821.3_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000026.1:144583-145740:- | gene-YDR532C_JAY291 | rna-NM_001180840.3_JAY291 | cds-NP_010821.3_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1453814-1454971:- | gene-YDR532C_MUCL30387 | rna-NM_001180840.3_MUCL30387 | cds-NP_010821.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1435238-1436395:- | gene-YDR532C_MUCL30388 | rna-NM_001180840.3_MUCL30388 | cds-NP_010821.3_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1425634-1426791:- | gene-YDR532C_MUCL39482 | rna-NM_001180840.3_MUCL39482 | cds-NP_010821.3_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1368287-1369444:- | gene-YDR532C_MUCL42920 | rna-NM_001180840.3_MUCL42920 | cds-NP_010821.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1499319-1500476:- | gene-YDR532C_NCIM3186 | rna-NM_001180840.3_NCIM3186 | cds-NP_010821.3_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1438927-1440084:- | gene-YDR532C_NCYC1407 | rna-NM_001180840.3_NCYC1407 | cds-NP_010821.3_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1449851-1451008:- | gene-YDR532C_PE2H3 | rna-NM_001180840.3_PE2H3 | cds-NP_010821.3_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1455319-1456476:- | gene-YDR532C_PE2H4 | rna-NM_001180840.3_PE2H4 | cds-NP_010821.3_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1499396-1500553:- | gene-YDR532C_S288C | rna-NM_001180840.3_S288C | cds-NP_010821.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:116561-117718:+ | gene-YDR532C_SA1 | rna-NM_001180840.3_SA1 | cds-NP_010821.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1450442-1451599:- | gene-YDR532C_ThermosaccDry | rna-NM_001180840.3_ThermosaccDry | cds-NP_010821.3_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1466241-1467398:- | gene-YDR532C_VR1 | rna-NM_001180840.3_VR1 | cds-NP_010821.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:493097-494254:- | gene-YDR532C_ZTW1 | rna-NM_001180840.3_ZTW1 | cds-NP_010821.3_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1459391-1460548:- | gene-YDR532C_Sparadoxus | rna-NM_001180840.3_Sparadoxus | cds-NP_010821.3_Sparadoxus | 88.5 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |