Gene name: KAR4
Reference locus (S288C): YCL055W
Gene biotype: protein_coding
Description: Mrna m6a methyltransferase non-catalytic subunit; Karyogamy protein KAR4; Transcription factor required for response to pheromones; also required during meiosis; exists in two forms, a slower-migrating form more abundant during vegetative growth and a faster-migrating form induced by pheromone
Top 10 interactors (score): IME4 (0.999); FUS1 (0.946); STE12 (0.898); AGA1 (0.875); KAR3 (0.841); KSS1 (0.792); CIK1 (0.772); STE2 (0.768); PRM2 (0.754); FIG1 (0.75); KAR5 (0.74); FUS2 (0.714); THO2 (0.706); PRM3 (0.7); MTQ2 (0.695); SEC66 (0.694); PHO92 (0.683); JEM1 (0.682); SPB1 (0.67); SST2 (0.668)
Homologues (species, bitscore): METTL14 (Homo sapiens, 115.9); Mettl14 (Mus musculus, 116.3); mettl14 (Danio rerio, 117.1); mettl14 (Xenopus tropicalis, 115.5); CG7818 (Drosophila melanogaster, 115.9); EMB1691 (Arabidopsis thaliana, 125.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:29221-30228:+ | gene-YCL055W_AKU4011 | rna-NM_001178699.1_AKU4011 | cds-NP_009876.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000086.1:15598-16605:- | gene-YCL055W_BG1 | rna-NM_001178699.1_BG1 | cds-NP_009876.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:16632-17639:+ | gene-YCL055W_Bruggeman | rna-NM_001178699.1_Bruggeman | cds-NP_009876.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:29102-30109:+ | gene-YCL055W_CAT1 | rna-NM_001178699.1_CAT1 | cds-NP_009876.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:29904-30911:+ | gene-YCL055W_CBS1585 | rna-NM_001178699.1_CBS1585 | cds-NP_009876.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:28453-29460:+ | gene-YCL055W_CBS436 | rna-NM_001178699.1_CBS436 | cds-NP_009876.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:17660-18667:+ | gene-YCL055W_CBS6412 | rna-NM_001178699.1_CBS6412 | cds-NP_009876.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:28678-29685:+ | gene-YCL055W_CBS6413 | rna-NM_001178699.1_CBS6413 | cds-NP_009876.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:27515-28522:+ | gene-YCL055W_CENPK1137D | rna-NM_001178699.1_CENPK1137D | cds-NP_009876.1_CENPK1137D | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:27454-28461:+ | gene-YCL055W_EthanolRed | rna-NM_001178699.1_EthanolRed | cds-NP_009876.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:28217-29224:+ | gene-YCL055W_FaliES1 | rna-NM_001178699.1_FaliES1 | cds-NP_009876.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000225.1:55114-56121:- | gene-YCL055W_JAY291 | rna-NM_001178699.1_JAY291 | cds-NP_009876.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:15637-16644:+ | gene-YCL055W_MUCL30387 | rna-NM_001178699.1_MUCL30387 | cds-NP_009876.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:15929-16936:+ | gene-YCL055W_MUCL30388 | rna-NM_001178699.1_MUCL30388 | cds-NP_009876.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:30291-31298:+ | gene-YCL055W_MUCL39482 | rna-NM_001178699.1_MUCL39482 | cds-NP_009876.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:16212-17219:+ | gene-YCL055W_MUCL42920 | rna-NM_001178699.1_MUCL42920 | cds-NP_009876.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:27561-28568:+ | gene-YCL055W_NCIM3186 | rna-NM_001178699.1_NCIM3186 | cds-NP_009876.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:30613-31620:+ | gene-YCL055W_NCYC1407 | rna-NM_001178699.1_NCYC1407 | cds-NP_009876.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:28386-29393:+ | gene-YCL055W_PE2H3 | rna-NM_001178699.1_PE2H3 | cds-NP_009876.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:28343-29350:+ | gene-YCL055W_PE2H4 | rna-NM_001178699.1_PE2H4 | cds-NP_009876.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:27929-28936:+ | gene-YCL055W_S288C | rna-NM_001178699.1_S288C | cds-NP_009876.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000061.1:15077-16084:+ | gene-YCL055W_SA1 | rna-NM_001178699.1_SA1 | cds-NP_009876.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:28535-29542:+ | gene-YCL055W_ThermosaccDry | rna-NM_001178699.1_ThermosaccDry | cds-NP_009876.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:33819-34826:+ | gene-YCL055W_VR1 | rna-NM_001178699.1_VR1 | cds-NP_009876.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:28760-29767:+ | gene-YCL055W_ZTW1 | rna-NM_001178699.1_ZTW1 | cds-NP_009876.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:58441-59445:+ | gene-YCL055W_Sparadoxus | rna-NM_001178699.1_Sparadoxus | cds-NP_009876.1_Sparadoxus | 91.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |