Gene name: KAR1
Reference locus (S288C): YNL188W
Gene biotype: protein_coding
Description: Cell division control protein KAR1; Protein involved in karyogamy and spindle pole body duplication; involved in karyogamy during mating; involved in spindle pole body duplication during mitosis; localizes to the half-bridge of the spindle pole body; interacts with Spc72p during karyogamy; also interacts with Cdc31p; essential gene
Top 10 interactors (score): CDC31 (0.998); SPC72 (0.966); SFI1 (0.963); BBP1 (0.933); KAR3 (0.903); MPS3 (0.901); SPC42 (0.895); SPC29 (0.89); SPC97 (0.876); TUB4 (0.863); CIK1 (0.855); SPC98 (0.833); URA3 (0.813); MPS2 (0.813); CNM67 (0.812); SPC110 (0.783); ADE2 (0.779); NBP1 (0.773); LEU2 (0.752); SUP35 (0.748)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:280075-281376:+ | gene-YNL188W_AKU4011 | rna-NM_001183026.1_AKU4011 | cds-NP_014211.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:184027-185328:+ | gene-YNL188W_BG1 | rna-NM_001183026.1_BG1 | cds-NP_014211.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:290132-291433:+ | gene-YNL188W_Bruggeman | rna-NM_001183026.1_Bruggeman | cds-NP_014211.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:332378-333679:+ | gene-YNL188W_CAT1 | rna-NM_001183026.1_CAT1 | cds-NP_014211.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:280730-282031:+ | gene-YNL188W_CBS1585 | rna-NM_001183026.1_CBS1585 | cds-NP_014211.1_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:349016-350317:+ | gene-YNL188W_CBS436 | rna-NM_001183026.1_CBS436 | cds-NP_014211.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:276132-277433:+ | gene-YNL188W_CBS6412 | rna-NM_001183026.1_CBS6412 | cds-NP_014211.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:277163-278464:+ | gene-YNL188W_CBS6413 | rna-NM_001183026.1_CBS6413 | cds-NP_014211.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:280136-281437:+ | gene-YNL188W_CENPK1137D | rna-NM_001183026.1_CENPK1137D | cds-NP_014211.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:277061-278362:+ | gene-YNL188W_EthanolRed | rna-NM_001183026.1_EthanolRed | cds-NP_014211.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:272974-274275:+ | gene-YNL188W_FaliES1 | rna-NM_001183026.1_FaliES1 | cds-NP_014211.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000260.1:44279-45580:- | gene-YNL188W_JAY291 | rna-NM_001183026.1_JAY291 | cds-NP_014211.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:285923-287224:+ | gene-YNL188W_MUCL30387 | rna-NM_001183026.1_MUCL30387 | cds-NP_014211.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:320265-321566:+ | gene-YNL188W_MUCL30388 | rna-NM_001183026.1_MUCL30388 | cds-NP_014211.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:277969-279270:+ | gene-YNL188W_MUCL39482 | rna-NM_001183026.1_MUCL39482 | cds-NP_014211.1_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:280335-281636:+ | gene-YNL188W_MUCL42920 | rna-NM_001183026.1_MUCL42920 | cds-NP_014211.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:286277-287578:+ | gene-YNL188W_NCIM3186 | rna-NM_001183026.1_NCIM3186 | cds-NP_014211.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:280063-281364:+ | gene-YNL188W_NCYC1407 | rna-NM_001183026.1_NCYC1407 | cds-NP_014211.1_NCYC1407 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:276971-278272:+ | gene-YNL188W_PE2H3 | rna-NM_001183026.1_PE2H3 | cds-NP_014211.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:276359-277660:+ | gene-YNL188W_PE2H4 | rna-NM_001183026.1_PE2H4 | cds-NP_014211.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:286308-287609:+ | gene-YNL188W_S288C | rna-NM_001183026.1_S288C | cds-NP_014211.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000018.1:125991-127292:- | gene-YNL188W_SA1 | rna-NM_001183026.1_SA1 | cds-NP_014211.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:273831-275132:+ | gene-YNL188W_ThermosaccDry | rna-NM_001183026.1_ThermosaccDry | cds-NP_014211.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:292295-293596:+ | gene-YNL188W_VR1 | rna-NM_001183026.1_VR1 | cds-NP_014211.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:183659-184960:+ | gene-YNL188W_ZTW1 | rna-NM_001183026.1_ZTW1 | cds-NP_014211.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:284318-285619:+ | gene-YNL188W_Sparadoxus | rna-NM_001183026.1_Sparadoxus | cds-NP_014211.1_Sparadoxus | 85.0 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |