Gene name: KAP104
Reference locus (S288C): YBR017C
Gene biotype: protein_coding
Description: Importin subunit beta-2; Transportin or cytosolic karyopherin beta 2; functions in the rg-nuclear localization signal-mediated nuclear import/reimport of mRNA-binding proteins Nab2p and Hrp1p; regulates asymmetric protein synthesis in daughter cells during mitosis; Belongs to the importin beta family. Importin beta-2 subfamily
Top 10 interactors (score): NAB2 (0.996); KAP123 (0.995); PSE1 (0.991); HRP1 (0.989); GSP1 (0.989); KAP114 (0.98); SRP1 (0.979); SXM1 (0.973); CRM1 (0.971); MTR10 (0.971); NMD5 (0.955); NUP2 (0.948); NTF2 (0.94); KAP95 (0.939); NUP100 (0.937); CSE1 (0.937); KAP122 (0.936); GSP2 (0.923); KAP120 (0.92); NUP116 (0.918)
Homologues (species, bitscore): TNPO1 (Homo sapiens, 459.1); Tnpo1 (Mus musculus, 457.6); tnpo2 (Danio rerio, 441.0); tnpo1 (Xenopus tropicalis, 438.7); Trn (Drosophila melanogaster, 461.8); imb-2 (Caenorhabditis elegans, 397.5); At2g16950 (Arabidopsis thaliana, 383.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:253392-256142:- | gene-YBR017C_AKU4011 | rna-NM_001178365.1_AKU4011 | cds-NP_009573.1_AKU4011 | 99.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:243535-246285:- | gene-YBR017C_BG1 | rna-NM_001178365.1_BG1 | cds-NP_009573.1_BG1 | 99.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:254115-256865:- | gene-YBR017C_Bruggeman | rna-NM_001178365.1_Bruggeman | cds-NP_009573.1_Bruggeman | 99.7 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:256411-259161:- | gene-YBR017C_CAT1 | rna-NM_001178365.1_CAT1 | cds-NP_009573.1_CAT1 | 99.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:245429-248179:- | gene-YBR017C_CBS1585 | rna-NM_001178365.1_CBS1585 | cds-NP_009573.1_CBS1585 | 99.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:253687-256437:- | gene-YBR017C_CBS436 | rna-NM_001178365.1_CBS436 | cds-NP_009573.1_CBS436 | 99.7 | 99.7 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:343933-346683:- | gene-YBR017C_CBS6412 | rna-NM_001178365.1_CBS6412 | cds-NP_009573.1_CBS6412 | 99.6 | 99.7 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:250797-253547:- | gene-YBR017C_CBS6413 | rna-NM_001178365.1_CBS6413 | cds-NP_009573.1_CBS6413 | 99.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:264713-267463:- | gene-YBR017C_CENPK1137D | rna-NM_001178365.1_CENPK1137D | cds-NP_009573.1_CENPK1137D | 99.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:380405-383155:- | gene-YBR017C_EthanolRed | rna-NM_001178365.1_EthanolRed | cds-NP_009573.1_EthanolRed | 99.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:268501-271251:- | gene-YBR017C_FaliES1 | rna-NM_001178365.1_FaliES1 | cds-NP_009573.1_FaliES1 | 99.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000048.1:26351-29101:+ | gene-YBR017C_JAY291 | rna-NM_001178365.1_JAY291 | cds-NP_009573.1_JAY291 | 99.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:254466-257216:- | gene-YBR017C_MUCL30387 | rna-NM_001178365.1_MUCL30387 | cds-NP_009573.1_MUCL30387 | 99.7 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:254965-257718:- | gene-YBR017C_MUCL30388 | rna-NM_001178365.1_MUCL30388 | cds-NP_009573.1_MUCL30388 | 99.8 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:245411-248161:- | gene-YBR017C_MUCL39482 | rna-NM_001178365.1_MUCL39482 | cds-NP_009573.1_MUCL39482 | 99.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:252868-255618:- | gene-YBR017C_MUCL42920 | rna-NM_001178365.1_MUCL42920 | cds-NP_009573.1_MUCL42920 | 99.7 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:270744-273500:- | gene-YBR017C_NCIM3186 | rna-NM_001178365.1_NCIM3186 | cds-NP_009573.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:246588-249338:- | gene-YBR017C_NCYC1407 | rna-NM_001178365.1_NCYC1407 | cds-NP_009573.1_NCYC1407 | 99.5 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:258759-261509:- | gene-YBR017C_PE2H3 | rna-NM_001178365.1_PE2H3 | cds-NP_009573.1_PE2H3 | 99.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:256427-259177:- | gene-YBR017C_PE2H4 | rna-NM_001178365.1_PE2H4 | cds-NP_009573.1_PE2H4 | 99.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:270947-273703:- | gene-YBR017C_S288C | rna-NM_001178365.1_S288C | cds-NP_009573.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000037.1:35003-37753:+ | gene-YBR017C_SA1 | rna-NM_001178365.1_SA1 | cds-NP_009573.1_SA1 | 99.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:268210-270960:- | gene-YBR017C_ThermosaccDry | rna-NM_001178365.1_ThermosaccDry | cds-NP_009573.1_ThermosaccDry | 99.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:250111-252861:- | gene-YBR017C_VR1 | rna-NM_001178365.1_VR1 | cds-NP_009573.1_VR1 | 99.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:244189-246939:- | gene-YBR017C_ZTW1 | rna-NM_001178365.1_ZTW1 | cds-NP_009573.1_ZTW1 | 99.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:280378-283128:- | gene-YBR017C_Sparadoxus | rna-NM_001178365.1_Sparadoxus | cds-NP_009573.1_Sparadoxus | 91.5 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |