Gene name: JNM1
Reference locus (S288C): YMR294W
Gene biotype: protein_coding
Description: Nuclear migration protein JNM1; Component of the yeast dynactin complex; consisting of Nip100p, Jnm1p, and Arp1p; required for proper nuclear migration and spindle partitioning during mitotic anaphase B
Top 10 interactors (score): NIP100 (0.999); LDB18 (0.998); ARP1 (0.996); ARP10 (0.947); KAR9 (0.942); PAC1 (0.941); NUM1 (0.934); PAC11 (0.921); KIP3 (0.918); DYN1 (0.912); BIM1 (0.911); CIN8 (0.889); KIP2 (0.88); NDL1 (0.85); BIK1 (0.841); PAC2 (0.82); DYN3 (0.813); KAR3 (0.799); IRC25 (0.753); POC4 (0.745)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:896016-897137:+ | gene-YMR294W_AKU4011 | rna-NM_001182802.1_AKU4011 | cds-NP_014022.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:56565-57686:- | gene-YMR294W_BG1 | rna-NM_001182802.1_BG1 | cds-NP_014022.1_BG1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:841226-842347:+ | gene-YMR294W_Bruggeman | rna-NM_001182802.1_Bruggeman | cds-NP_014022.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:844509-845630:+ | gene-YMR294W_CAT1 | rna-NM_001182802.1_CAT1 | cds-NP_014022.1_CAT1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:828267-829388:+ | gene-YMR294W_CBS1585 | rna-NM_001182802.1_CBS1585 | cds-NP_014022.1_CBS1585 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:850584-851705:+ | gene-YMR294W_CBS436 | rna-NM_001182802.1_CBS436 | cds-NP_014022.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:939842-940963:+ | gene-YMR294W_CBS6412 | rna-NM_001182802.1_CBS6412 | cds-NP_014022.1_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:827386-828507:+ | gene-YMR294W_CBS6413 | rna-NM_001182802.1_CBS6413 | cds-NP_014022.1_CBS6413 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:851510-852631:+ | gene-YMR294W_CENPK1137D | rna-NM_001182802.1_CENPK1137D | cds-NP_014022.1_CENPK1137D | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:888711-889832:+ | gene-YMR294W_EthanolRed | rna-NM_001182802.1_EthanolRed | cds-NP_014022.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:834738-835859:+ | gene-YMR294W_FaliES1 | rna-NM_001182802.1_FaliES1 | cds-NP_014022.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000262.1:15877-16998:- | gene-YMR294W_JAY291 | rna-NM_001182802.1_JAY291 | cds-NP_014022.1_JAY291 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:835050-836171:+ | gene-YMR294W_MUCL30387 | rna-NM_001182802.1_MUCL30387 | cds-NP_014022.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:844442-845563:+ | gene-YMR294W_MUCL30388 | rna-NM_001182802.1_MUCL30388 | cds-NP_014022.1_MUCL30388 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:829332-830453:+ | gene-YMR294W_MUCL39482 | rna-NM_001182802.1_MUCL39482 | cds-NP_014022.1_MUCL39482 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:838154-839275:+ | gene-YMR294W_MUCL42920 | rna-NM_001182802.1_MUCL42920 | cds-NP_014022.1_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:856920-858041:+ | gene-YMR294W_NCIM3186 | rna-NM_001182802.1_NCIM3186 | cds-NP_014022.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:828986-830107:+ | gene-YMR294W_NCYC1407 | rna-NM_001182802.1_NCYC1407 | cds-NP_014022.1_NCYC1407 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:844806-845927:+ | gene-YMR294W_PE2H3 | rna-NM_001182802.1_PE2H3 | cds-NP_014022.1_PE2H3 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:840780-841901:+ | gene-YMR294W_PE2H4 | rna-NM_001182802.1_PE2H4 | cds-NP_014022.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:856966-858087:+ | gene-YMR294W_S288C | rna-NM_001182802.1_S288C | cds-NP_014022.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000036.1:34763-35884:+ | gene-YMR294W_SA1 | rna-NM_001182802.1_SA1 | cds-NP_014022.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:830906-832027:+ | gene-YMR294W_ThermosaccDry | rna-NM_001182802.1_ThermosaccDry | cds-NP_014022.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:844659-845780:+ | gene-YMR294W_VR1 | rna-NM_001182802.1_VR1 | cds-NP_014022.1_VR1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:246141-247262:+ | gene-YMR294W_ZTW1 | rna-NM_001182802.1_ZTW1 | cds-NP_014022.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:849540-850661:+ | gene-YMR294W_Sparadoxus | rna-NM_001182802.1_Sparadoxus | cds-NP_014022.1_Sparadoxus | 86.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |