Gene name: JJJ1
Reference locus (S288C): YNL227C
Gene biotype: protein_coding
Description: Dnaj homolog subfamily a member 5; J protein JJJ1; Co-chaperone that stimulates the ATPase activity of Ssa1p; required for a late step of ribosome biogenesis; associated with the cytosolic large ribosomal subunit; contains a J-domain; mutation causes defects in fluid-phase endocytosis
Top 10 interactors (score): REI1 (0.999); ARX1 (0.995); NMD3 (0.993); TIF6 (0.989); RLP24 (0.988); NOG2 (0.979); NUG1 (0.974); MAK21 (0.974); YVH1 (0.969); RPF2 (0.968); RPL3 (0.965); YTM1 (0.965); MRT4 (0.956); BUD20 (0.956); RPL25 (0.955); AFG2 (0.955); CIC1 (0.952); NOG1 (0.95); SSF1 (0.95); RRS1 (0.943)
Homologues (species, bitscore): DNAJC21 (Homo sapiens, 228.0); Dnajc21 (Mus musculus, 229.6); dnajc21 (Danio rerio, 219.9); dnajc21 (Xenopus tropicalis, 222.2); CG2790 (Drosophila melanogaster, 211.5); dnj-17 (Caenorhabditis elegans, 194.9); AT1G74250 (Arabidopsis thaliana, 193.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:214437-216209:- | gene-YNL227C_AKU4011 | rna-NM_001183065.1_AKU4011 | cds-NP_014172.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:118382-120154:- | gene-YNL227C_BG1 | rna-NM_001183065.1_BG1 | cds-NP_014172.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:224488-226260:- | gene-YNL227C_Bruggeman | rna-NM_001183065.1_Bruggeman | cds-NP_014172.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:231644-233416:- | gene-YNL227C_CAT1 | rna-NM_001183065.1_CAT1 | cds-NP_014172.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:214834-216606:- | gene-YNL227C_CBS1585 | rna-NM_001183065.1_CBS1585 | cds-NP_014172.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:209920-211692:- | gene-YNL227C_CBS436 | rna-NM_001183065.1_CBS436 | cds-NP_014172.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:210868-212640:- | gene-YNL227C_CBS6412 | rna-NM_001183065.1_CBS6412 | cds-NP_014172.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:211516-213288:- | gene-YNL227C_CBS6413 | rna-NM_001183065.1_CBS6413 | cds-NP_014172.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:214464-216235:- | gene-YNL227C_CENPK1137D | rna-NM_001183065.1_CENPK1137D | cds-NP_014172.1_CENPK1137D | 99.3 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:212087-213859:- | gene-YNL227C_EthanolRed | rna-NM_001183065.1_EthanolRed | cds-NP_014172.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:206829-208601:- | gene-YNL227C_FaliES1 | rna-NM_001183065.1_FaliES1 | cds-NP_014172.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000082.1:117974-119746:- | gene-YNL227C_JAY291 | rna-NM_001183065.1_JAY291 | cds-NP_014172.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:220022-221794:- | gene-YNL227C_MUCL30387 | rna-NM_001183065.1_MUCL30387 | cds-NP_014172.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:218607-220379:- | gene-YNL227C_MUCL30388 | rna-NM_001183065.1_MUCL30388 | cds-NP_014172.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:212324-214096:- | gene-YNL227C_MUCL39482 | rna-NM_001183065.1_MUCL39482 | cds-NP_014172.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:214579-216351:- | gene-YNL227C_MUCL42920 | rna-NM_001183065.1_MUCL42920 | cds-NP_014172.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:220628-222400:- | gene-YNL227C_NCIM3186 | rna-NM_001183065.1_NCIM3186 | cds-NP_014172.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:214417-216189:- | gene-YNL227C_NCYC1407 | rna-NM_001183065.1_NCYC1407 | cds-NP_014172.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:211317-213089:- | gene-YNL227C_PE2H3 | rna-NM_001183065.1_PE2H3 | cds-NP_014172.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:210705-212477:- | gene-YNL227C_PE2H4 | rna-NM_001183065.1_PE2H4 | cds-NP_014172.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:220659-222431:- | gene-YNL227C_S288C | rna-NM_001183065.1_S288C | cds-NP_014172.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000040.1:29873-31645:+ | gene-YNL227C_SA1 | rna-NM_001183065.1_SA1 | cds-NP_014172.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:207685-209457:- | gene-YNL227C_ThermosaccDry | rna-NM_001183065.1_ThermosaccDry | cds-NP_014172.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:226673-228445:- | gene-YNL227C_VR1 | rna-NM_001183065.1_VR1 | cds-NP_014172.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:118003-119774:- | gene-YNL227C_ZTW1 | rna-NM_001183065.1_ZTW1 | cds-NP_014172.1_ZTW1 | 99.4 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:218065-219837:- | gene-YNL227C_Sparadoxus | rna-NM_001183065.1_Sparadoxus | cds-NP_014172.1_Sparadoxus | 89.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |