Gene name: JIP3
Reference locus (S288C): YLR331C
Gene biotype: protein_coding
Description: Uncharacterized protein JIP3; Putative protein of unknown function; conserved among S. cerevisiae strains; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene MID2
Top 10 interactors (score): JIP4 (0.779); KIN1 (0.694); GEA2 (0.654)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:739594-739971:- | gene-YLR331C_AKU4011 | rna-NM_001348861.1_AKU4011 | cds-NP_001335801.1_AKU4011 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:6758-7135:- | gene-YLR331C_BG1 | rna-NM_001348861.1_BG1 | cds-NP_001335801.1_BG1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:775946-776323:- | gene-YLR331C_Bruggeman | rna-NM_001348861.1_Bruggeman | cds-NP_001335801.1_Bruggeman | 98.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:773499-773876:- | gene-YLR331C_CAT1 | rna-NM_001348861.1_CAT1 | cds-NP_001335801.1_CAT1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:774511-774888:- | gene-YLR331C_CBS1585 | rna-NM_001348861.1_CBS1585 | cds-NP_001335801.1_CBS1585 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:758556-758933:- | gene-YLR331C_CBS436 | rna-NM_001348861.1_CBS436 | cds-NP_001335801.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:811922-812299:- | gene-YLR331C_CBS6412 | rna-NM_001348861.1_CBS6412 | cds-NP_001335801.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:775182-775559:- | gene-YLR331C_CBS6413 | rna-NM_001348861.1_CBS6413 | cds-NP_001335801.1_CBS6413 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:775288-775665:- | gene-YLR331C_CENPK1137D | rna-NM_001348861.1_CENPK1137D | cds-NP_001335801.1_CENPK1137D | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:732412-732789:- | gene-YLR331C_EthanolRed | rna-NM_001348861.1_EthanolRed | cds-NP_001335801.1_EthanolRed | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:761613-761990:- | gene-YLR331C_FaliES1 | rna-NM_001348861.1_FaliES1 | cds-NP_001335801.1_FaliES1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000296.1:5958-6335:+ | gene-YLR331C_JAY291 | rna-NM_001348861.1_JAY291 | cds-NP_001335801.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:774166-774543:- | gene-YLR331C_MUCL30387 | rna-NM_001348861.1_MUCL30387 | cds-NP_001335801.1_MUCL30387 | 98.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:779749-780126:- | gene-YLR331C_MUCL30388 | rna-NM_001348861.1_MUCL30388 | cds-NP_001335801.1_MUCL30388 | 98.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:775751-776128:- | gene-YLR331C_MUCL39482 | rna-NM_001348861.1_MUCL39482 | cds-NP_001335801.1_MUCL39482 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:770913-771290:- | gene-YLR331C_MUCL42920 | rna-NM_001348861.1_MUCL42920 | cds-NP_001335801.1_MUCL42920 | 98.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:790643-791020:- | gene-YLR331C_NCIM3186 | rna-NM_001348861.1_NCIM3186 | cds-NP_001335801.1_NCIM3186 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:785092-785469:- | gene-YLR331C_NCYC1407 | rna-NM_001348861.1_NCYC1407 | cds-NP_001335801.1_NCYC1407 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:772319-772696:- | gene-YLR331C_PE2H3 | rna-NM_001348861.1_PE2H3 | cds-NP_001335801.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:772063-772440:- | gene-YLR331C_PE2H4 | rna-NM_001348861.1_PE2H4 | cds-NP_001335801.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:790669-791046:- | gene-YLR331C_S288C | rna-NM_001348861.1_S288C | cds-NP_001335801.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:257923-258300:+ | gene-YLR331C_SA1 | rna-NM_001348861.1_SA1 | cds-NP_001335801.1_SA1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:763504-763881:- | gene-YLR331C_ThermosaccDry | rna-NM_001348861.1_ThermosaccDry | cds-NP_001335801.1_ThermosaccDry | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:775578-775955:- | gene-YLR331C_VR1 | rna-NM_001348861.1_VR1 | cds-NP_001335801.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:101894-102271:- | gene-YLR331C_ZTW1 | rna-NM_001348861.1_ZTW1 | cds-NP_001335801.1_ZTW1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |