Gene name: JID1
Reference locus (S288C): YPR061C
Gene biotype: protein_coding
Description: J domain-containing protein 1; Probable Hsp40p co-chaperone; has a DnaJ-like domain and appears to be involved in ER-associated degradation of misfolded proteins containing a tightly folded cytoplasmic domain; inhibits replication of Brome mosaic virus in S. cerevisiae
Top 10 interactors (score): APJ1 (0.795); JEM1 (0.788); MDJ1 (0.788); SUE1 (0.787); XDJ1 (0.787); JJJ3 (0.787); HLJ1 (0.787); JJJ2 (0.787); CWC23 (0.787); DJP1 (0.786); JJJ1 (0.786); CAJ1 (0.786); MDJ2 (0.786); SWA2 (0.786); ERJ5 (0.786); SCJ1 (0.786); SIS1 (0.785); JAC1 (0.785); ZUO1 (0.785); SEC63 (0.785)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:647645-648550:- | gene-YPR061C_AKU4011 | rna-NM_001184158.1_AKU4011 | cds-NP_015386.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:249133-250038:+ | gene-YPR061C_BG1 | rna-NM_001184158.1_BG1 | cds-NP_015386.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:725310-726215:- | gene-YPR061C_Bruggeman | rna-NM_001184158.1_Bruggeman | cds-NP_015386.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:768764-769669:- | gene-YPR061C_CAT1 | rna-NM_001184158.1_CAT1 | cds-NP_015386.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:651331-652236:- | gene-YPR061C_CBS1585 | rna-NM_001184158.1_CBS1585 | cds-NP_015386.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:665706-666611:- | gene-YPR061C_CBS436 | rna-NM_001184158.1_CBS436 | cds-NP_015386.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:655079-655984:- | gene-YPR061C_CBS6412 | rna-NM_001184158.1_CBS6412 | cds-NP_015386.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:648279-649184:- | gene-YPR061C_CBS6413 | rna-NM_001184158.1_CBS6413 | cds-NP_015386.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:675942-676847:- | gene-YPR061C_CENPK1137D | rna-NM_001184158.1_CENPK1137D | cds-NP_015386.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:974837-975742:- | gene-YPR061C_EthanolRed | rna-NM_001184158.1_EthanolRed | cds-NP_015386.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:653474-654379:- | gene-YPR061C_FaliES1 | rna-NM_001184158.1_FaliES1 | cds-NP_015386.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000446.1:25426-26331:- | gene-YPR061C_JAY291 | rna-NM_001184158.1_JAY291 | cds-NP_015386.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:666571-667476:- | gene-YPR061C_MUCL30387 | rna-NM_001184158.1_MUCL30387 | cds-NP_015386.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:665275-666180:- | gene-YPR061C_MUCL30388 | rna-NM_001184158.1_MUCL30388 | cds-NP_015386.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:644588-645493:- | gene-YPR061C_MUCL39482 | rna-NM_001184158.1_MUCL39482 | cds-NP_015386.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:707412-708317:- | gene-YPR061C_MUCL42920 | rna-NM_001184158.1_MUCL42920 | cds-NP_015386.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:675960-676865:- | gene-YPR061C_NCIM3186 | rna-NM_001184158.1_NCIM3186 | cds-NP_015386.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:652518-653423:- | gene-YPR061C_NCYC1407 | rna-NM_001184158.1_NCYC1407 | cds-NP_015386.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:658729-659634:- | gene-YPR061C_PE2H3 | rna-NM_001184158.1_PE2H3 | cds-NP_015386.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:658377-659282:- | gene-YPR061C_PE2H4 | rna-NM_001184158.1_PE2H4 | cds-NP_015386.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:675977-676882:- | gene-YPR061C_S288C | rna-NM_001184158.1_S288C | cds-NP_015386.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:23810-24715:+ | gene-YPR061C_SA1 | rna-NM_001184158.1_SA1 | cds-NP_015386.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:653249-654154:- | gene-YPR061C_ThermosaccDry | rna-NM_001184158.1_ThermosaccDry | cds-NP_015386.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:669403-670308:- | gene-YPR061C_VR1 | rna-NM_001184158.1_VR1 | cds-NP_015386.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:652473-653378:- | gene-YPR061C_ZTW1 | rna-NM_001184158.1_ZTW1 | cds-NP_015386.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:653228-654133:- | gene-YPR061C_Sparadoxus | rna-NM_001184158.1_Sparadoxus | cds-NP_015386.1_Sparadoxus | 89.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |