Gene name: ITT1
Reference locus (S288C): YML068W
Gene biotype: protein_coding
Description: Protein that modulates the efficiency of translation termination; interacts with translation release factors eRF1 (Sup45p) and eRF3 (Sup35p) in vitro, contains a zinc finger domain characteristic of the TRIAD class of proteins; Belongs to the RBR family
Top 10 interactors (score): SUP35 (0.964); ATP5 (0.961); HEL1 (0.954); SUP45 (0.841); SMM1 (0.839); ECM32 (0.776); APC11 (0.715); YJL055W (0.698); NAM7 (0.695); ETP1 (0.691); BCD1 (0.686); BCP1 (0.668); BSD2 (0.667); ACP1 (0.646); ERG27 (0.643); SNF11 (0.628); PIG2 (0.61); TOM1 (0.603); COF1 (0.601); RPA190 (0.593)
Homologues (species, bitscore): RNF14 (Homo sapiens, 103.2); Rnf14 (Mus musculus, 104.4); rnf14 (Danio rerio, 104.4); rnf14 (Xenopus tropicalis, 101.3); CG11321 (Drosophila melanogaster, 59.7); F56D2.5 (Caenorhabditis elegans, 92.8); NHL8 (Arabidopsis thaliana, 103.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:131285-132679:+ | gene-YML068W_AKU4011 | rna-NM_001182427.1_AKU4011 | cds-NP_013643.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:343460-344854:- | gene-YML068W_BG1 | rna-NM_001182427.1_BG1 | cds-NP_013643.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:137427-138821:+ | gene-YML068W_Bruggeman | rna-NM_001182427.1_Bruggeman | cds-NP_013643.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:139101-140495:+ | gene-YML068W_CAT1 | rna-NM_001182427.1_CAT1 | cds-NP_013643.1_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:131294-132688:+ | gene-YML068W_CBS1585 | rna-NM_001182427.1_CBS1585 | cds-NP_013643.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:137195-138589:+ | gene-YML068W_CBS436 | rna-NM_001182427.1_CBS436 | cds-NP_013643.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:132002-133396:+ | gene-YML068W_CBS6412 | rna-NM_001182427.1_CBS6412 | cds-NP_013643.1_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:130477-131871:+ | gene-YML068W_CBS6413 | rna-NM_001182427.1_CBS6413 | cds-NP_013643.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:132273-133667:+ | gene-YML068W_CENPK1137D | rna-NM_001182427.1_CENPK1137D | cds-NP_013643.1_CENPK1137D | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:131558-132952:+ | gene-YML068W_EthanolRed | rna-NM_001182427.1_EthanolRed | cds-NP_013643.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:132065-133459:+ | gene-YML068W_FaliES1 | rna-NM_001182427.1_FaliES1 | cds-NP_013643.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000366.1:23649-25043:- | gene-YML068W_JAY291 | rna-NM_001182427.1_JAY291 | cds-NP_013643.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:135957-137351:+ | gene-YML068W_MUCL30387 | rna-NM_001182427.1_MUCL30387 | cds-NP_013643.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:139132-140526:+ | gene-YML068W_MUCL30388 | rna-NM_001182427.1_MUCL30388 | cds-NP_013643.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:131305-132699:+ | gene-YML068W_MUCL39482 | rna-NM_001182427.1_MUCL39482 | cds-NP_013643.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:137138-138532:+ | gene-YML068W_MUCL42920 | rna-NM_001182427.1_MUCL42920 | cds-NP_013643.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:137504-138898:+ | gene-YML068W_NCIM3186 | rna-NM_001182427.1_NCIM3186 | cds-NP_013643.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:132100-133494:+ | gene-YML068W_NCYC1407 | rna-NM_001182427.1_NCYC1407 | cds-NP_013643.1_NCYC1407 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:137509-138903:+ | gene-YML068W_PE2H3 | rna-NM_001182427.1_PE2H3 | cds-NP_013643.1_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:137373-138767:+ | gene-YML068W_PE2H4 | rna-NM_001182427.1_PE2H4 | cds-NP_013643.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:137550-138944:+ | gene-YML068W_S288C | rna-NM_001182427.1_S288C | cds-NP_013643.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000041.1:45317-46711:- | gene-YML068W_SA1 | rna-NM_001182427.1_SA1 | cds-NP_013643.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:131357-132751:+ | gene-YML068W_ThermosaccDry | rna-NM_001182427.1_ThermosaccDry | cds-NP_013643.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:135721-137115:+ | gene-YML068W_VR1 | rna-NM_001182427.1_VR1 | cds-NP_013643.1_VR1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:110894-112288:+ | gene-YML068W_ZTW1 | rna-NM_001182427.1_ZTW1 | cds-NP_013643.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:142474-143868:+ | gene-YML068W_Sparadoxus | rna-NM_001182427.1_Sparadoxus | cds-NP_013643.1_Sparadoxus | 88.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |