ITS2-1 (YNCL0013C)

Gene profile

Gene name: ITS2-1
Reference locus (S288C): YNCL0013C
Gene biotype: misc_RNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:438150-438381:- gene-YNCL0013C_AKU4011 rna-NR_132210.1_AKU4011 Unknown 99.1 99.5 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000096.1:2693-2924:- gene-YNCL0013C_BG1 rna-NR_132210.1_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:449688-449920:- gene-YNCL0013C_Bruggeman rna-NR_132210.1_Bruggeman Unknown 98.7 99.5 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:448843-449074:- gene-YNCL0013C_CAT1 rna-NR_132210.1_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:444808-445039:- gene-YNCL0013C_CBS1585 rna-NR_132210.1_CBS1585 Unknown 99.1 99.5 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005354.1:435041-435271:- gene-YNCL0013C_CBS436 rna-NR_132210.1_CBS436 Unknown 99.5 99.5 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:442204-442435:- gene-YNCL0013C_CBS6412 rna-NR_132210.1_CBS6412 Unknown 99.1 99.5 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:445083-445314:- gene-YNCL0013C_CBS6413 rna-NR_132210.1_CBS6413 Unknown 99.1 99.5 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable JH711475.1:1-170:- gene-YNCL0013C_CENPK1137D rna-NR_132210.1_CENPK1137D Unknown 73.2 73.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:437658-437889:- gene-YNCL0013C_EthanolRed rna-NR_132210.1_EthanolRed Unknown 99.1 99.5 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:437320-437551:- gene-YNCL0013C_FaliES1 rna-NR_132210.1_FaliES1 Unknown 99.1 99.5 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000137.1:4257-4488:+ gene-YNCL0013C_JAY291 rna-NR_132210.1_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:449642-449874:- gene-YNCL0013C_MUCL30387 rna-NR_132210.1_MUCL30387 Unknown 98.7 99.5 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:454351-454583:- gene-YNCL0013C_MUCL30388 rna-NR_132210.1_MUCL30388 Unknown 98.7 99.5 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:445911-446142:- gene-YNCL0013C_MUCL39482 rna-NR_132210.1_MUCL39482 Unknown 99.1 99.5 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:445640-445872:- gene-YNCL0013C_MUCL42920 rna-NR_132210.1_MUCL42920 Unknown 98.7 99.5 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:455156-455387:- gene-YNCL0013C_NCIM3186 rna-NR_132210.1_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:438210-438441:- gene-YNCL0013C_NCYC1407 rna-NR_132210.1_NCYC1407 Unknown 99.1 99.5 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:443142-443373:- gene-YNCL0013C_PE2H3 rna-NR_132210.1_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:442883-443114:- gene-YNCL0013C_PE2H4 rna-NR_132210.1_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:455182-455413:- gene-YNCL0013C_S288C rna-NR_132210.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000133.1:1551-1782:- gene-YNCL0013C_SA1 rna-NR_132210.1_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:439033-439263:- gene-YNCL0013C_ThermosaccDry rna-NR_132210.1_ThermosaccDry Unknown 99.5 99.5 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:451336-451567:- gene-YNCL0013C_VR1 rna-NR_132210.1_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files