ITS1-2 (YNCL0024C)

Gene profile

Gene name: ITS1-2
Reference locus (S288C): YNCL0024C
Gene biotype: misc_RNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:438540-438900:- gene-YNCL0024C_AKU4011 rna-NR_132221.1_AKU4011 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000096.1:3083-3443:- gene-YNCL0024C_BG1 rna-NR_132221.1_BG1 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:450079-450446:- gene-YNCL0024C_Bruggeman rna-NR_132221.1_Bruggeman Unknown 98.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:449233-449593:- gene-YNCL0024C_CAT1 rna-NR_132221.1_CAT1 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:445198-445558:- gene-YNCL0024C_CBS1585 rna-NR_132221.1_CBS1585 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005354.1:435430-435790:- gene-YNCL0024C_CBS436 rna-NR_132221.1_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:442594-442954:- gene-YNCL0024C_CBS6412 rna-NR_132221.1_CBS6412 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:445473-445833:- gene-YNCL0024C_CBS6413 rna-NR_132221.1_CBS6413 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable JH711475.1:329-689:- gene-YNCL0024C_CENPK1137D rna-NR_132221.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:438048-438408:- gene-YNCL0024C_EthanolRed rna-NR_132221.1_EthanolRed Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:437710-438070:- gene-YNCL0024C_FaliES1 rna-NR_132221.1_FaliES1 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:450033-450400:- gene-YNCL0024C_MUCL30387 rna-NR_132221.1_MUCL30387 Unknown 98.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:454742-455106:- gene-YNCL0024C_MUCL30388 rna-NR_132221.1_MUCL30388 Unknown 98.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:446301-446661:- gene-YNCL0024C_MUCL39482 rna-NR_132221.1_MUCL39482 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:446031-446395:- gene-YNCL0024C_MUCL42920 rna-NR_132221.1_MUCL42920 Unknown 98.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:455546-455906:- gene-YNCL0024C_NCIM3186 rna-NR_132221.1_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:438600-438960:- gene-YNCL0024C_NCYC1407 rna-NR_132221.1_NCYC1407 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:452653-453013:- gene-YNCL0024C_PE2H3 rna-NR_132221.1_PE2H3 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:452394-452754:- gene-YNCL0024C_PE2H4 rna-NR_132221.1_PE2H4 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:464709-465069:- gene-YNCL0024C_S288C rna-NR_132221.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000133.1:1941-2301:- gene-YNCL0024C_SA1 rna-NR_132221.1_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:439422-439782:- gene-YNCL0024C_ThermosaccDry rna-NR_132221.1_ThermosaccDry Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:451726-452086:- gene-YNCL0024C_VR1 rna-NR_132221.1_VR1 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files