Gene name: ISF1
Reference locus (S288C): YMR081C
Gene biotype: protein_coding
Description: Increasing suppression factor 1; Serine-rich, hydrophilic protein; overexpression suppresses growth defects of hap2, hap3, and hap4 mutants; expression is under glucose control; cotranscribed with NAM7 in a cyp1 mutant; ISF1 has a paralog, MBR1, that arose from the whole genome duplication
Top 10 interactors (score): RGI1 (0.931); YMR206W (0.929); GAC1 (0.908); MRK1 (0.886); TMA10 (0.859); RGI2 (0.813); IGD1 (0.791); YNL144C (0.759); YAL064W-B (0.745); EGO4 (0.736); YHR213W-A (0.712); MPC3 (0.696); YMR317W (0.693); HAP1 (0.65); PRM7 (0.62); CSR2 (0.598); YHR213W (0.57); COG7 (0.57); YIG1 (0.568); PES4 (0.565)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:468027-469043:- | gene-YMR081C_AKU4011 | rna-NM_001182580.1_AKU4011 | cds-NP_013798.1_AKU4011 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:73983-74999:+ | gene-YMR081C_BG1 | rna-NM_001182580.1_BG1 | cds-NP_013798.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:410204-411220:- | gene-YMR081C_Bruggeman | rna-NM_001182580.1_Bruggeman | cds-NP_013798.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:410519-411535:- | gene-YMR081C_CAT1 | rna-NM_001182580.1_CAT1 | cds-NP_013798.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:400967-401983:- | gene-YMR081C_CBS1585 | rna-NM_001182580.1_CBS1585 | cds-NP_013798.1_CBS1585 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:406280-407296:- | gene-YMR081C_CBS436 | rna-NM_001182580.1_CBS436 | cds-NP_013798.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:514041-515057:- | gene-YMR081C_CBS6412 | rna-NM_001182580.1_CBS6412 | cds-NP_013798.1_CBS6412 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:400225-401241:- | gene-YMR081C_CBS6413 | rna-NM_001182580.1_CBS6413 | cds-NP_013798.1_CBS6413 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:424183-425199:- | gene-YMR081C_CENPK1137D | rna-NM_001182580.1_CENPK1137D | cds-NP_013798.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:400858-401874:- | gene-YMR081C_EthanolRed | rna-NM_001182580.1_EthanolRed | cds-NP_013798.1_EthanolRed | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:404024-405040:- | gene-YMR081C_FaliES1 | rna-NM_001182580.1_FaliES1 | cds-NP_013798.1_FaliES1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:32184-33200:+ | gene-YMR081C_JAY291 | rna-NM_001182580.1_JAY291 | cds-NP_013798.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:405938-406934:- | gene-YMR081C_MUCL30387 | rna-NM_001182580.1_MUCL30387 | cds-NP_013798.1_MUCL30387 | 96.3 | 98.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:410624-411640:- | gene-YMR081C_MUCL30388 | rna-NM_001182580.1_MUCL30388 | cds-NP_013798.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:401255-402271:- | gene-YMR081C_MUCL39482 | rna-NM_001182580.1_MUCL39482 | cds-NP_013798.1_MUCL39482 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:407941-408957:- | gene-YMR081C_MUCL42920 | rna-NM_001182580.1_MUCL42920 | cds-NP_013798.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:430033-431049:- | gene-YMR081C_NCIM3186 | rna-NM_001182580.1_NCIM3186 | cds-NP_013798.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:401170-402186:- | gene-YMR081C_NCYC1407 | rna-NM_001182580.1_NCYC1407 | cds-NP_013798.1_NCYC1407 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:406879-407895:- | gene-YMR081C_PE2H3 | rna-NM_001182580.1_PE2H3 | cds-NP_013798.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:412974-413990:- | gene-YMR081C_PE2H4 | rna-NM_001182580.1_PE2H4 | cds-NP_013798.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:430079-431095:- | gene-YMR081C_S288C | rna-NM_001182580.1_S288C | cds-NP_013798.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:119072-120088:+ | gene-YMR081C_SA1 | rna-NM_001182580.1_SA1 | cds-NP_013798.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:401827-402843:- | gene-YMR081C_ThermosaccDry | rna-NM_001182580.1_ThermosaccDry | cds-NP_013798.1_ThermosaccDry | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:413463-414479:- | gene-YMR081C_VR1 | rna-NM_001182580.1_VR1 | cds-NP_013798.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:378102-379118:- | gene-YMR081C_ZTW1 | rna-NM_001182580.1_ZTW1 | cds-NP_013798.1_ZTW1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:414508-415515:- | gene-YMR081C_Sparadoxus | rna-NM_001182580.1_Sparadoxus | cds-NP_013798.1_Sparadoxus | 88.3 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |