Gene name: ISC10
Reference locus (S288C): YER180C
Gene biotype: protein_coding
Description: Meiosis-specific protein ISC10; Protein required for sporulation; transcript is induced 7.5 hours after induction of meiosis, expected to play significant role in the formation of reproductive cells
Top 10 interactors (score): DIT1 (0.78); DMC1 (0.729); IME1 (0.672); RAD57 (0.65)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:531238-532041:- | gene-YER180C_AKU4011 | rna-NM_001179070.1_AKU4011 | cds-NP_011107.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000176.1:1329-2132:+ | gene-YER180C_BG1 | rna-NM_001179070.1_BG1 | cds-NP_011107.1_BG1 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:543984-544787:- | gene-YER180C_Bruggeman | rna-NM_001179070.1_Bruggeman | cds-NP_011107.1_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:530572-531375:- | gene-YER180C_CAT1 | rna-NM_001179070.1_CAT1 | cds-NP_011107.1_CAT1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:531042-531845:- | gene-YER180C_CBS1585 | rna-NM_001179070.1_CBS1585 | cds-NP_011107.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:540933-541736:- | gene-YER180C_CBS436 | rna-NM_001179070.1_CBS436 | cds-NP_011107.1_CBS436 | 98.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:529019-529822:- | gene-YER180C_CBS6412 | rna-NM_001179070.1_CBS6412 | cds-NP_011107.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:537588-538391:- | gene-YER180C_CBS6413 | rna-NM_001179070.1_CBS6413 | cds-NP_011107.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:547489-548292:- | gene-YER180C_CENPK1137D | rna-NM_001179070.1_CENPK1137D | cds-NP_011107.1_CENPK1137D | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:537205-538008:- | gene-YER180C_EthanolRed | rna-NM_001179070.1_EthanolRed | cds-NP_011107.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:538141-538944:- | gene-YER180C_FaliES1 | rna-NM_001179070.1_FaliES1 | cds-NP_011107.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000169.1:954-1757:+ | gene-YER180C_JAY291 | rna-NM_001179070.1_JAY291 | cds-NP_011107.1_JAY291 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:531294-532097:- | gene-YER180C_MUCL30387 | rna-NM_001179070.1_MUCL30387 | cds-NP_011107.1_MUCL30387 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:534207-535010:- | gene-YER180C_MUCL30388 | rna-NM_001179070.1_MUCL30388 | cds-NP_011107.1_MUCL30388 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:527000-527803:- | gene-YER180C_MUCL39482 | rna-NM_001179070.1_MUCL39482 | cds-NP_011107.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:541526-542329:- | gene-YER180C_MUCL42920 | rna-NM_001179070.1_MUCL42920 | cds-NP_011107.1_MUCL42920 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:549723-550526:- | gene-YER180C_NCIM3186 | rna-NM_001179070.1_NCIM3186 | cds-NP_011107.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:536456-537259:- | gene-YER180C_NCYC1407 | rna-NM_001179070.1_NCYC1407 | cds-NP_011107.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:552396-553199:- | gene-YER180C_PE2H3 | rna-NM_001179070.1_PE2H3 | cds-NP_011107.1_PE2H3 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:542329-543132:- | gene-YER180C_PE2H4 | rna-NM_001179070.1_PE2H4 | cds-NP_011107.1_PE2H4 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:549724-550527:- | gene-YER180C_S288C | rna-NM_001179070.1_S288C | cds-NP_011107.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000030.1:101879-102682:- | gene-YER180C_SA1 | rna-NM_001179070.1_SA1 | cds-NP_011107.1_SA1 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:538941-539744:- | gene-YER180C_ThermosaccDry | rna-NM_001179070.1_ThermosaccDry | cds-NP_011107.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:532232-533035:- | gene-YER180C_VR1 | rna-NM_001179070.1_VR1 | cds-NP_011107.1_VR1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000011.1:51794-52597:- | gene-YER180C_ZTW1 | rna-NM_001179070.1_ZTW1 | cds-NP_011107.1_ZTW1 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:540231-541034:- | gene-YER180C_Sparadoxus | rna-NM_001179070.1_Sparadoxus | cds-NP_011107.1_Sparadoxus | 88.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |