Gene name: IRC9
Reference locus (S288C): YJL142C
Gene biotype: protein_coding
Description: Putative uncharacterized protein IRC9; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene YJL141C; null mutant displays increased levels of spontaneous Rad52p foci
Top 10 interactors (score): YAK1 (0.941); IRC14 (0.897); IRC4 (0.868); IRC19 (0.849); IRC13 (0.811); HSP42 (0.787); GSY1 (0.766); IRC7 (0.745); GLC3 (0.726); IRC5 (0.695); AHC1 (0.686); YJL144W (0.608); TPS1 (0.607); RFC4 (0.574); IRC24 (0.568); IGD1 (0.556); BUD27 (0.553); TSL1 (0.538); WSS1 (0.525); DDR2 (0.518)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:136113-136504:- | gene-YJL142C_AKU4011 | rna-NM_001395034.1_AKU4011 | cds-NP_001381964.1_AKU4011 | 98.4 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:477215-477606:+ | gene-YJL142C_BG1 | rna-NM_001395034.1_BG1 | cds-NP_001381964.1_BG1 | 97.7 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:147949-148341:- | gene-YJL142C_Bruggeman | rna-NM_001395034.1_Bruggeman | cds-NP_001381964.1_Bruggeman | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:151737-152129:- | gene-YJL142C_CAT1 | rna-NM_001395034.1_CAT1 | cds-NP_001381964.1_CAT1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:141747-142138:- | gene-YJL142C_CBS1585 | rna-NM_001395034.1_CBS1585 | cds-NP_001381964.1_CBS1585 | 98.4 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:166499-166891:- | gene-YJL142C_CBS436 | rna-NM_001395034.1_CBS436 | cds-NP_001381964.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:138156-138547:- | gene-YJL142C_CBS6412 | rna-NM_001395034.1_CBS6412 | cds-NP_001381964.1_CBS6412 | 98.4 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:139220-139611:- | gene-YJL142C_CBS6413 | rna-NM_001395034.1_CBS6413 | cds-NP_001381964.1_CBS6413 | 98.4 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:130208-130599:- | gene-YJL142C_CENPK1137D | rna-NM_001395034.1_CENPK1137D | cds-NP_001381964.1_CENPK1137D | 98.7 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:140271-140662:- | gene-YJL142C_EthanolRed | rna-NM_001395034.1_EthanolRed | cds-NP_001381964.1_EthanolRed | 98.7 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:145749-146140:- | gene-YJL142C_FaliES1 | rna-NM_001395034.1_FaliES1 | cds-NP_001381964.1_FaliES1 | 98.7 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000099.1:26930-27321:- | gene-YJL142C_JAY291 | rna-NM_001395034.1_JAY291 | cds-NP_001381964.1_JAY291 | 97.7 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:150218-150610:- | gene-YJL142C_MUCL30387 | rna-NM_001395034.1_MUCL30387 | cds-NP_001381964.1_MUCL30387 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:146270-146662:- | gene-YJL142C_MUCL30388 | rna-NM_001395034.1_MUCL30388 | cds-NP_001381964.1_MUCL30388 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:140489-140880:- | gene-YJL142C_MUCL39482 | rna-NM_001395034.1_MUCL39482 | cds-NP_001381964.1_MUCL39482 | 98.4 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:146009-146401:- | gene-YJL142C_MUCL42920 | rna-NM_001395034.1_MUCL42920 | cds-NP_001381964.1_MUCL42920 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:147798-148190:- | gene-YJL142C_NCIM3186 | rna-NM_001395034.1_NCIM3186 | cds-NP_001381964.1_NCIM3186 | 98.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:139098-139489:- | gene-YJL142C_NCYC1407 | rna-NM_001395034.1_NCYC1407 | cds-NP_001381964.1_NCYC1407 | 98.4 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:151907-152298:- | gene-YJL142C_PE2H3 | rna-NM_001395034.1_PE2H3 | cds-NP_001381964.1_PE2H3 | 97.7 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:151550-151941:- | gene-YJL142C_PE2H4 | rna-NM_001395034.1_PE2H4 | cds-NP_001381964.1_PE2H4 | 97.7 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:147819-148211:- | gene-YJL142C_S288C | rna-NM_001395034.1_S288C | cds-NP_001381964.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000022.1:5403-5795:+ | gene-YJL142C_SA1 | rna-NM_001395034.1_SA1 | cds-NP_001381964.1_SA1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:138940-139331:- | gene-YJL142C_ThermosaccDry | rna-NM_001395034.1_ThermosaccDry | cds-NP_001381964.1_ThermosaccDry | 98.7 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:146024-146415:- | gene-YJL142C_VR1 | rna-NM_001395034.1_VR1 | cds-NP_001381964.1_VR1 | 97.7 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:126229-126620:- | gene-YJL142C_ZTW1 | rna-NM_001395034.1_ZTW1 | cds-NP_001381964.1_ZTW1 | 98.7 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:151522-151921:- | gene-YJL142C_Sparadoxus | rna-NM_001395034.1_Sparadoxus | cds-NP_001381964.1_Sparadoxus | 80.4 | 98.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |