Gene name: IRC22
Reference locus (S288C): YEL001C
Gene biotype: protein_coding
Description: Increased recombination centers protein 22; Protein of unknown function; green fluorescent protein (GFP)-fusion localizes to the ER; YEL001C is non-essential; null mutant displays increased levels of spontaneous Rad52p foci; Belongs to the IRC22 family
Top 10 interactors (score): PTH2 (0.827); DSK2 (0.722); MKC7 (0.703); DDI1 (0.658); YPS6 (0.65); YPS3 (0.62); YPS1 (0.597); MET2 (0.525); STI1 (0.499); RAD23 (0.499); RPN10 (0.48)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:143982-144659:- | gene-YEL001C_AKU4011 | rna-NM_001178816.1_AKU4011 | cds-NP_010915.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:281011-281688:+ | gene-YEL001C_BG1 | rna-NM_001178816.1_BG1 | cds-NP_010915.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:150514-151191:- | gene-YEL001C_Bruggeman | rna-NM_001178816.1_Bruggeman | cds-NP_010915.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:146912-147589:- | gene-YEL001C_CAT1 | rna-NM_001178816.1_CAT1 | cds-NP_010915.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:144291-144968:- | gene-YEL001C_CBS1585 | rna-NM_001178816.1_CBS1585 | cds-NP_010915.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:145570-146247:- | gene-YEL001C_CBS436 | rna-NM_001178816.1_CBS436 | cds-NP_010915.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:144185-144862:- | gene-YEL001C_CBS6412 | rna-NM_001178816.1_CBS6412 | cds-NP_010915.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:148833-149510:- | gene-YEL001C_CBS6413 | rna-NM_001178816.1_CBS6413 | cds-NP_010915.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:148128-148805:- | gene-YEL001C_CENPK1137D | rna-NM_001178816.1_CENPK1137D | cds-NP_010915.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:144647-145324:- | gene-YEL001C_EthanolRed | rna-NM_001178816.1_EthanolRed | cds-NP_010915.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:144906-145583:- | gene-YEL001C_FaliES1 | rna-NM_001178816.1_FaliES1 | cds-NP_010915.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000024.1:11887-12564:- | gene-YEL001C_JAY291 | rna-NM_001178816.1_JAY291 | cds-NP_010915.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:148216-148893:- | gene-YEL001C_MUCL30387 | rna-NM_001178816.1_MUCL30387 | cds-NP_010915.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:144737-145414:- | gene-YEL001C_MUCL30388 | rna-NM_001178816.1_MUCL30388 | cds-NP_010915.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:143327-144004:- | gene-YEL001C_MUCL39482 | rna-NM_001178816.1_MUCL39482 | cds-NP_010915.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:147923-148600:- | gene-YEL001C_MUCL42920 | rna-NM_001178816.1_MUCL42920 | cds-NP_010915.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:150300-150977:- | gene-YEL001C_NCIM3186 | rna-NM_001178816.1_NCIM3186 | cds-NP_010915.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:148403-149080:- | gene-YEL001C_NCYC1407 | rna-NM_001178816.1_NCYC1407 | cds-NP_010915.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:152714-153391:- | gene-YEL001C_PE2H3 | rna-NM_001178816.1_PE2H3 | cds-NP_010915.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:148629-149306:- | gene-YEL001C_PE2H4 | rna-NM_001178816.1_PE2H4 | cds-NP_010915.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:150301-150978:- | gene-YEL001C_S288C | rna-NM_001178816.1_S288C | cds-NP_010915.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000020.1:92613-93290:+ | gene-YEL001C_SA1 | rna-NM_001178816.1_SA1 | cds-NP_010915.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:145312-145989:- | gene-YEL001C_ThermosaccDry | rna-NM_001178816.1_ThermosaccDry | cds-NP_010915.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:144805-145482:- | gene-YEL001C_VR1 | rna-NM_001178816.1_VR1 | cds-NP_010915.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:143340-144017:- | gene-YEL001C_ZTW1 | rna-NM_001178816.1_ZTW1 | cds-NP_010915.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:148012-148689:- | gene-YEL001C_Sparadoxus | rna-NM_001178816.1_Sparadoxus | cds-NP_010915.1_Sparadoxus | 89.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |