Gene name: IRC16
Reference locus (S288C): YPR038W
Gene biotype: protein_coding
Description: Putative increased recombination centers protein 16; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene YPR037C; null mutant displays increased levels of spontaneous Rad52p foci
Top 10 interactors (score): Unknown
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:618522-618881:+ | gene-YPR038W_AKU4011 | rna-NM_001395041.1_AKU4011 | cds-NP_001381971.1_AKU4011 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:278809-279168:- | gene-YPR038W_BG1 | rna-NM_001395041.1_BG1 | cds-NP_001381971.1_BG1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:696157-696516:+ | gene-YPR038W_Bruggeman | rna-NM_001395041.1_Bruggeman | cds-NP_001381971.1_Bruggeman | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:739126-739485:+ | gene-YPR038W_CAT1 | rna-NM_001395041.1_CAT1 | cds-NP_001381971.1_CAT1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:622206-622565:+ | gene-YPR038W_CBS1585 | rna-NM_001395041.1_CBS1585 | cds-NP_001381971.1_CBS1585 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:636567-636926:+ | gene-YPR038W_CBS436 | rna-NM_001395041.1_CBS436 | cds-NP_001381971.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:625954-626313:+ | gene-YPR038W_CBS6412 | rna-NM_001395041.1_CBS6412 | cds-NP_001381971.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:619155-619514:+ | gene-YPR038W_CBS6413 | rna-NM_001395041.1_CBS6413 | cds-NP_001381971.1_CBS6413 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:646813-647172:+ | gene-YPR038W_CENPK1137D | rna-NM_001395041.1_CENPK1137D | cds-NP_001381971.1_CENPK1137D | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:616442-616801:+ | gene-YPR038W_EthanolRed | rna-NM_001395041.1_EthanolRed | cds-NP_001381971.1_EthanolRed | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:624245-624604:+ | gene-YPR038W_FaliES1 | rna-NM_001395041.1_FaliES1 | cds-NP_001381971.1_FaliES1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000116.1:3307-3666:- | gene-YPR038W_JAY291 | rna-NM_001395041.1_JAY291 | cds-NP_001381971.1_JAY291 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:637369-637728:+ | gene-YPR038W_MUCL30387 | rna-NM_001395041.1_MUCL30387 | cds-NP_001381971.1_MUCL30387 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:636064-636423:+ | gene-YPR038W_MUCL30388 | rna-NM_001395041.1_MUCL30388 | cds-NP_001381971.1_MUCL30388 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:615463-615822:+ | gene-YPR038W_MUCL39482 | rna-NM_001395041.1_MUCL39482 | cds-NP_001381971.1_MUCL39482 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:678260-678619:+ | gene-YPR038W_MUCL42920 | rna-NM_001395041.1_MUCL42920 | cds-NP_001381971.1_MUCL42920 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:646819-647178:+ | gene-YPR038W_NCIM3186 | rna-NM_001395041.1_NCIM3186 | cds-NP_001381971.1_NCIM3186 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:623394-623753:+ | gene-YPR038W_NCYC1407 | rna-NM_001395041.1_NCYC1407 | cds-NP_001381971.1_NCYC1407 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:629598-629957:+ | gene-YPR038W_PE2H3 | rna-NM_001395041.1_PE2H3 | cds-NP_001381971.1_PE2H3 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:629246-629605:+ | gene-YPR038W_PE2H4 | rna-NM_001395041.1_PE2H4 | cds-NP_001381971.1_PE2H4 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:646836-647195:+ | gene-YPR038W_S288C | rna-NM_001395041.1_S288C | cds-NP_001381971.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:53577-53936:- | gene-YPR038W_SA1 | rna-NM_001395041.1_SA1 | cds-NP_001381971.1_SA1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:624045-624404:+ | gene-YPR038W_ThermosaccDry | rna-NM_001395041.1_ThermosaccDry | cds-NP_001381971.1_ThermosaccDry | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:640262-640621:+ | gene-YPR038W_VR1 | rna-NM_001395041.1_VR1 | cds-NP_001381971.1_VR1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:623362-623721:+ | gene-YPR038W_ZTW1 | rna-NM_001395041.1_ZTW1 | cds-NP_001381971.1_ZTW1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:624158-624519:+ | gene-YPR038W_Sparadoxus | rna-NM_001395041.1_Sparadoxus | cds-NP_001381971.1_Sparadoxus | 87.8 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |