Gene name: IRC13
Reference locus (S288C): YOR235W
Gene biotype: protein_coding
Description: Increased recombination centers protein 13; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; null mutant displays increased levels of spontaneous Rad52 foci
Top 10 interactors (score): BUD26 (0.849); YLR232W (0.849); IRC9 (0.811); IRC15 (0.671); IRC24 (0.573); RTT103 (0.571); CPR7 (0.568); DIA2 (0.564); MNL1 (0.529); ADK1 (0.48); IRC14 (0.453)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:770642-770956:+ | gene-YOR235W_AKU4011 | rna-NM_001348879.1_AKU4011 | cds-NP_001335817.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:172682-172996:+ | gene-YOR235W_BG1 | rna-NM_001348879.1_BG1 | cds-NP_001335817.1_BG1 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:756109-756423:+ | gene-YOR235W_Bruggeman | rna-NM_001348879.1_Bruggeman | cds-NP_001335817.1_Bruggeman | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:756759-757073:+ | gene-YOR235W_CAT1 | rna-NM_001348879.1_CAT1 | cds-NP_001335817.1_CAT1 | 98.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:753631-753945:+ | gene-YOR235W_CBS1585 | rna-NM_001348879.1_CBS1585 | cds-NP_001335817.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:752326-752640:+ | gene-YOR235W_CBS436 | rna-NM_001348879.1_CBS436 | cds-NP_001335817.1_CBS436 | 98.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:750750-751064:+ | gene-YOR235W_CBS6412 | rna-NM_001348879.1_CBS6412 | cds-NP_001335817.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:759390-759704:+ | gene-YOR235W_CBS6413 | rna-NM_001348879.1_CBS6413 | cds-NP_001335817.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:779632-779946:+ | gene-YOR235W_CENPK1137D | rna-NM_001348879.1_CENPK1137D | cds-NP_001335817.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:746762-747076:+ | gene-YOR235W_EthanolRed | rna-NM_001348879.1_EthanolRed | cds-NP_001335817.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:752161-752475:+ | gene-YOR235W_FaliES1 | rna-NM_001348879.1_FaliES1 | cds-NP_001335817.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000381.1:74362-74676:- | gene-YOR235W_JAY291 | rna-NM_001348879.1_JAY291 | cds-NP_001335817.1_JAY291 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:760380-760694:+ | gene-YOR235W_MUCL30387 | rna-NM_001348879.1_MUCL30387 | cds-NP_001335817.1_MUCL30387 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:767498-767812:+ | gene-YOR235W_MUCL30388 | rna-NM_001348879.1_MUCL30388 | cds-NP_001335817.1_MUCL30388 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:760961-761275:+ | gene-YOR235W_MUCL39482 | rna-NM_001348879.1_MUCL39482 | cds-NP_001335817.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:770550-770864:+ | gene-YOR235W_MUCL42920 | rna-NM_001348879.1_MUCL42920 | cds-NP_001335817.1_MUCL42920 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:779759-780073:+ | gene-YOR235W_NCIM3186 | rna-NM_001348879.1_NCIM3186 | cds-NP_001335817.1_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:761060-761374:+ | gene-YOR235W_NCYC1407 | rna-NM_001348879.1_NCYC1407 | cds-NP_001335817.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:760362-760676:+ | gene-YOR235W_PE2H3 | rna-NM_001348879.1_PE2H3 | cds-NP_001335817.1_PE2H3 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:770739-771053:+ | gene-YOR235W_PE2H4 | rna-NM_001348879.1_PE2H4 | cds-NP_001335817.1_PE2H4 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:779870-780184:+ | gene-YOR235W_S288C | rna-NM_001348879.1_S288C | cds-NP_001335817.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:189863-190177:+ | gene-YOR235W_SA1 | rna-NM_001348879.1_SA1 | cds-NP_001335817.1_SA1 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:751344-751658:+ | gene-YOR235W_ThermosaccDry | rna-NM_001348879.1_ThermosaccDry | cds-NP_001335817.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:814802-815116:+ | gene-YOR235W_VR1 | rna-NM_001348879.1_VR1 | cds-NP_001335817.1_VR1 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:484263-484577:+ | gene-YOR235W_ZTW1 | rna-NM_001348879.1_ZTW1 | cds-NP_001335817.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:757265-757576:+ | gene-YOR235W_Sparadoxus | rna-NM_001348879.1_Sparadoxus | cds-NP_001335817.1_Sparadoxus | 76.9 | 95.5 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |