Gene name: IPP1
Reference locus (S288C): YBR011C
Gene biotype: protein_coding
Description: Inorganic diphosphatase ipp1; Cytoplasmic inorganic pyrophosphatase (PPase); homodimer that catalyzes the rapid exchange of oxygens from Pi with water, highly expressed and essential for viability, active-site residues show identity to those from E. coli PPase
Top 10 interactors (score): VMA16 (0.988); YPT1 (0.966); SEC23 (0.964); SAR1 (0.963); HAT2 (0.952); VMA11 (0.943); VMA3 (0.941); PPA2 (0.935); PMA1 (0.911); PMA2 (0.908); ATP1 (0.853); HEM2 (0.852); ISW2 (0.832); ISW1 (0.832); APA1 (0.813); ATP2 (0.798); ATP3 (0.797); RGL1 (0.776); PDA1 (0.762); VMA4 (0.76)
Homologues (species, bitscore): PPA1 (Homo sapiens, 305.4); Ppa1 (Mus musculus, 309.7); ppa2 (Danio rerio, 308.1); ppa2 (Xenopus tropicalis, 308.5); Nurf-38 (Drosophila melanogaster, 321.6); pyp-1 (Caenorhabditis elegans, 304.3); PPa6 (Arabidopsis thaliana, 222.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:245500-246363:- | gene-YBR011C_AKU4011 | rna-NM_001178359.1_AKU4011 | cds-NP_009565.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:235607-236470:- | gene-YBR011C_BG1 | rna-NM_001178359.1_BG1 | cds-NP_009565.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:246208-247071:- | gene-YBR011C_Bruggeman | rna-NM_001178359.1_Bruggeman | cds-NP_009565.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:248485-249348:- | gene-YBR011C_CAT1 | rna-NM_001178359.1_CAT1 | cds-NP_009565.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:237537-238400:- | gene-YBR011C_CBS1585 | rna-NM_001178359.1_CBS1585 | cds-NP_009565.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:245779-246642:- | gene-YBR011C_CBS436 | rna-NM_001178359.1_CBS436 | cds-NP_009565.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:336038-336901:- | gene-YBR011C_CBS6412 | rna-NM_001178359.1_CBS6412 | cds-NP_009565.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:242902-243765:- | gene-YBR011C_CBS6413 | rna-NM_001178359.1_CBS6413 | cds-NP_009565.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:256799-257662:- | gene-YBR011C_CENPK1137D | rna-NM_001178359.1_CENPK1137D | cds-NP_009565.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:372497-373360:- | gene-YBR011C_EthanolRed | rna-NM_001178359.1_EthanolRed | cds-NP_009565.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:260594-261457:- | gene-YBR011C_FaliES1 | rna-NM_001178359.1_FaliES1 | cds-NP_009565.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000048.1:36145-37008:+ | gene-YBR011C_JAY291 | rna-NM_001178359.1_JAY291 | cds-NP_009565.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:246559-247422:- | gene-YBR011C_MUCL30387 | rna-NM_001178359.1_MUCL30387 | cds-NP_009565.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:247059-247922:- | gene-YBR011C_MUCL30388 | rna-NM_001178359.1_MUCL30388 | cds-NP_009565.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:237519-238382:- | gene-YBR011C_MUCL39482 | rna-NM_001178359.1_MUCL39482 | cds-NP_009565.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:244961-245824:- | gene-YBR011C_MUCL42920 | rna-NM_001178359.1_MUCL42920 | cds-NP_009565.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:256909-257772:- | gene-YBR011C_NCIM3186 | rna-NM_001178359.1_NCIM3186 | cds-NP_009565.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:238695-239558:- | gene-YBR011C_NCYC1407 | rna-NM_001178359.1_NCYC1407 | cds-NP_009565.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:250852-251715:- | gene-YBR011C_PE2H3 | rna-NM_001178359.1_PE2H3 | cds-NP_009565.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:248520-249383:- | gene-YBR011C_PE2H4 | rna-NM_001178359.1_PE2H4 | cds-NP_009565.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:257112-257975:- | gene-YBR011C_S288C | rna-NM_001178359.1_S288C | cds-NP_009565.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000037.1:44797-45660:+ | gene-YBR011C_SA1 | rna-NM_001178359.1_SA1 | cds-NP_009565.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:260303-261166:- | gene-YBR011C_ThermosaccDry | rna-NM_001178359.1_ThermosaccDry | cds-NP_009565.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:242198-243061:- | gene-YBR011C_VR1 | rna-NM_001178359.1_VR1 | cds-NP_009565.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:236289-237152:- | gene-YBR011C_ZTW1 | rna-NM_001178359.1_ZTW1 | cds-NP_009565.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:272111-272974:- | gene-YBR011C_Sparadoxus | rna-NM_001178359.1_Sparadoxus | cds-NP_009565.1_Sparadoxus | 96.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |